RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 CNTFP26441 200 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 LRPAP1P30533 357 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 HOXA7P31268 230 aaPredicted RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 GPD2P43304 727 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 STARP49675 285 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 CDK7P50613 346 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 NEK4P51957 841 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 HK2P52789 917 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 GBX2P52951 348 aaPredicted RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 GUCY2DQ02846 1103 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 PTPN11Q06124 597 aaPredicted RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 RAD51Q06609 339 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 PPARAQ07869 468 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 ORC1Q13415 861 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 TUBB2AQ13885 445 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 KPNB1Q14974 876 aaKnown RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 PCBP1Q15365 356 aaKnown RBP eCLIP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 RTN1Q16799 776 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 SMU1Q2TAY7 513 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 ADCK5Q3MIX3 580 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 IQCCQ4KMZ1 466 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 TIGD2Q4W5G0 525 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 SAPCD1Q5SSQ6 148 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 MARCH8Q5T0T0 291 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 TRIM72Q6ZMU5 477 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF574Q6ZN55 896 aaPredicted RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 DCDC5Q6ZRR9 648 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 RBM43Q6ZSC3 357 aaKnown RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 SYDE1Q6ZW31 735 aaPredicted RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 C16orf59Q7L2K0 433 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF765Q7L2R6 523 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 UBE3BQ7Z3V4 1068 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 HPS6Q86YV9 775 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 CAMK1DQ8IU85 385 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 TRIM59Q8IWR1 403 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 MPP5Q8N3R9 675 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 ZGPATQ8N5A5 531 aaKnown RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF527Q8NB42 609 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 SIMC1Q8NDZ2 872 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 TRPV1Q8NER1 839 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 TCP10LQ8TDR4 215 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 ASAP3Q8TDY4 903 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 CHPT1Q8WUD6 406 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 DEPDC1BQ8WUY9 529 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 NELFBQ8WX92 580 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 IP6K1Q92551 441 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 GTF3AQ92664 365 aaKnown RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 ZUFSPQ96AP4 578 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 TRIM43Q96BQ3 446 aaPredicted RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 VWCEQ96DN2 955 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF333Q96JL9 665 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 RHOVQ96L33 236 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 MYRFLQ96LU7 910 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 CCT8L2Q96SF2 557 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 TUBB2BQ9BVA1 445 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 TMEM60Q9H2L4 133 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 MOV10Q9HCE1 1003 aaKnown RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 FAM114A2Q9NRY5 505 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF275Q9NSD4 429 aaPredicted RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 WWOXQ9NZC7 414 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 UBP1Q9NZI7 540 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 GRHPRQ9UBQ7 328 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 PCDHGA1Q9Y5H4 931 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 CLDN16Q9Y5I7 305 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 NESP48681 1621 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 CLTCL1P53675 1640 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 UGGT2Q9NYU1 1516 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 NUP155O75694 1391 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 PNPLA6Q8IY17 1366 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 TTC26A0AVF1 554 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 NCF1BA6NI72 391 aaPredicted RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 NCF1CA8MVU1 366 aaPredicted RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 PDE2AO00408 941 aaPredicted RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 RASGRF2O14827 1237 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 ANGPT2O15123 496 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 TO15178 435 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 PPM1DO15297 605 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 KRT86O43790 486 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 HSF2BPO75031 334 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF623O75123 536 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 SCGB1D1O95968 90 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 FUCA1P04066 466 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 NFICP08651 508 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 RALAP11233 206 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 IL1R1P14778 569 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 GNSP15586 552 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 VEGFAP15692 232 aaPredicted RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 TNFSF4P23510 183 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 PTBP1P26599 531 aaKnown RBP eCLIP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 HTR7P34969 479 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 NNMTP40261 264 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 CEBPAP49715 358 aaPredicted RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 EIF2B2P49770 351 aaKnown RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 CPT1AP50416 773 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF41P51814 821 aaPredicted RBP3.09□□□□□ -1.91
CBWD3-209ENST00000614377 RAD23AP54725 363 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 NPEPPSP55786 919 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 OCRLQ01968 901 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 MAPK7Q13164 816 aa3.09□□□□□ -1.91
CBWD3-209ENST00000614377 PMS2P3Q13401 168 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms