RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 RASA4O43374 803 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 AVILO75366 819 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 SPAG6O75602 509 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 LATS1O95835 1130 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 KLKB1P03952 638 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 MYOGP15173 224 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 PFKLP17858 780 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 HDCP19113 662 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 CDC25CP30307 473 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 CORO1AP31146 461 aaKnown RBP9.1□□□□□ -0.95
CCDC47-207ENST00000612558 SLC6A4P31645 630 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 CD68P34810 354 aaPredicted RBP9.1□□□□□ -0.95
CCDC47-207ENST00000612558 ELK3P41970 407 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 IRAK1P51617 712 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 YBEYP58557 167 aaPredicted RBP9.1□□□□□ -0.95
CCDC47-207ENST00000612558 GPX6P59796 221 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 LONRF1Q17RB8 773 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 ANO4Q32M45 955 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 PARP15Q460N3 678 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 C9orf50Q5SZB4 431 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 ADGRF1Q5T601 910 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 TXNDC8Q6A555 127 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 PDE12Q6L8Q7 609 aaKnown RBP9.1□□□□□ -0.95
CCDC47-207ENST00000612558 LRRC8BQ6P9F7 803 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 C3orf62Q6ZUJ4 267 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 GAREM2Q75VX8 874 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 TMC8Q8IU68 726 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 EPS8L3Q8TE67 593 aaKnown RBP9.1□□□□□ -0.95
CCDC47-207ENST00000612558 GCNAQ96QF7 691 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 CYP2S1Q96SQ9 504 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 IL12RB2Q99665 862 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 WDR83Q9BRX9 315 aaKnown RBP9.1□□□□□ -0.95
CCDC47-207ENST00000612558 STMN4Q9H169 189 aaPredicted RBP9.1□□□□□ -0.95
CCDC47-207ENST00000612558 GBA3Q9H227 469 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 PPCSQ9HAB8 311 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 STOML2Q9UJZ1 356 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 ADAM21Q9UKJ8 722 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 AGO1Q9UL18 857 aaKnown RBP9.1□□□□□ -0.95
CCDC47-207ENST00000612558 NOVA2Q9UNW9 492 aaKnown RBP9.1□□□□□ -0.95
CCDC47-207ENST00000612558 CEP290O15078 2479 aa9.1□□□□□ -0.95
CCDC47-207ENST00000612558 DENND4CQ5VZ89 1909 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 SMIM23A6NLE4 172 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 F5H423 210 aaPredicted RBP9.09□□□□□ -0.95
CCDC47-207ENST00000612558 GRM6O15303 877 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 CACNG3O60359 315 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 RAMP2O60895 175 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 CDH16O75309 829 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 SUN1O94901 812 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 FGF19O95750 216 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 AP2A1O95782 977 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 AGTP01019 485 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 CA3P07451 260 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 GSTA2P09210 222 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 IRF1P10914 325 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 SSTR1P30872 391 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 SLCO1A2P46721 670 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 RENBPP51606 427 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 GYS2P54840 703 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 CDH4P55283 916 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 SMAD3P84022 425 aaKnown RBP9.09□□□□□ -0.95
CCDC47-207ENST00000612558 MTM1Q13496 603 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 CAMK1Q14012 370 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 HNRNPDQ14103 355 aaKnown RBP9.09□□□□□ -0.95
CCDC47-207ENST00000612558 PRPSAP1Q14558 356 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 POLD3Q15054 466 aaPredicted RBP9.09□□□□□ -0.95
CCDC47-207ENST00000612558 TNFAIP8L3Q5GJ75 292 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 EMC10Q5UCC4 262 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 RFWD3Q6PCD5 774 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 ZNF534Q76KX8 674 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 CIR1Q86X95 450 aaPredicted RBP9.09□□□□□ -0.95
CCDC47-207ENST00000612558 IGDCC3Q8IVU1 814 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 RIBC1Q8N443 379 aaPredicted RBP9.09□□□□□ -0.95
CCDC47-207ENST00000612558 SH2D3CQ8N5H7 860 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 CNTD1Q8N815 330 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 ARL14EPQ8N8R7 260 aaPredicted RBP9.09□□□□□ -0.95
CCDC47-207ENST00000612558 MAML1Q92585 1016 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 TLCD1Q96CP7 247 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 MYEOVQ96EZ4 313 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 HMCESQ96FZ2 354 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 SIGLEC10Q96LC7 697 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 PPP1R2P1Q96PQ5 205 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 CDK15Q96Q40 435 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 TGS1Q96RS0 853 aaKnown RBP9.09□□□□□ -0.95
CCDC47-207ENST00000612558 SLC22A12Q96S37 553 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 ASAH2Q9NR71 780 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 SMPD4Q9NXE4 827 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 FETUBQ9UGM5 382 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 CHMP2BQ9UQN3 213 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 AAR2Q9Y312 384 aaKnown RBP9.09□□□□□ -0.95
CCDC47-207ENST00000612558 PCDHA11Q9Y5I1 949 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 ZFP37Q9Y6Q3 630 aaPredicted RBP9.09□□□□□ -0.95
CCDC47-207ENST00000612558 OBSL1O75147 1896 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 PDE4DIPQ5VU43 2346 aa9.09□□□□□ -0.95
CCDC47-207ENST00000612558 LAMA2P24043 3122 aaKnown RBP9.09□□□□□ -0.95
CCDC47-207ENST00000612558 EXOC1LA0A1B0GW35 172 aa9.08□□□□□ -0.96
CCDC47-207ENST00000612558 SDR42E2A6NKP2 422 aa9.08□□□□□ -0.96
CCDC47-207ENST00000612558 GRXCR1A8MXD5 290 aa9.08□□□□□ -0.96
CCDC47-207ENST00000612558 CCL16O15467 120 aa9.08□□□□□ -0.96
CCDC47-207ENST00000612558 CLDN11O75508 207 aa9.08□□□□□ -0.96
CCDC47-207ENST00000612558 ANXA9O76027 345 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms