RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ADAMTS1Q9UHI8 967 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 EIF2B4Q9UI10 523 aaKnown RBP12.62□□□□□ -0.39
CBWD3-208ENST00000612050 DNAI1Q9UI46 699 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 OR51B4Q9Y5P0 310 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 GVINP1Q7Z2Y8 2422 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 A0A0D9SEW6 157 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 DCDC2BA2VCK2 349 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 DDX3XO00571 662 aaKnown RBP eCLIP12.61□□□□□ -0.39
CBWD3-208ENST00000612050 ARHGAP33O14559 1287 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 ATMINO43313 823 aaPredicted RBP12.61□□□□□ -0.39
CBWD3-208ENST00000612050 CER1O95813 267 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 C7P10643 843 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 SRCP12931 536 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 MAOBP27338 520 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 NUDT1P36639 197 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 PBX1P40424 430 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 SERPINH1P50454 418 aaKnown RBP12.61□□□□□ -0.39
CBWD3-208ENST00000612050 AFF3P51826 1226 aaKnown RBP12.61□□□□□ -0.39
CBWD3-208ENST00000612050 YBEYP58557 167 aaPredicted RBP12.61□□□□□ -0.39
CBWD3-208ENST00000612050 RAD51Q06609 339 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 PPP1R15BQ5SWA1 713 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 KIAA0895LQ68EN5 471 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 RYBPQ8N488 228 aaPredicted RBP12.61□□□□□ -0.39
CBWD3-208ENST00000612050 PCDH20Q8N6Y1 951 aaKnown RBP12.61□□□□□ -0.39
CBWD3-208ENST00000612050 OR7D4Q8NG98 312 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 OR14C36Q8NHC7 312 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 PIP4K2CQ8TBX8 421 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 SYT11Q9BT88 431 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 ISCUQ9H1K1 167 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 LCMT1Q9UIC8 334 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 FZD10Q9ULW2 581 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 AP4E1Q9UPM8 1137 aa12.61□□□□□ -0.39
CBWD3-208ENST00000612050 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.61□□□□□ -0.39
CBWD3-208ENST00000612050 TBC1D3DA0A087WVF3 549 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 TBC1D3IA0A087WXS9 549 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 TBC1D3EA0A087X179 549 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 TBC1D3KA0A087X1G2 549 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 TCRBV5S1A1TA0A578 114 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 TBC1D3FA6NER0 549 aaPredicted RBP12.6□□□□□ -0.39
CBWD3-208ENST00000612050 TBC1D3LB9A6J9 549 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 I6L893 689 aaPredicted RBP12.6□□□□□ -0.39
CBWD3-208ENST00000612050 KPNA3O00505 521 aaPredicted RBP12.6□□□□□ -0.39
CBWD3-208ENST00000612050 SNAP91O60641 907 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 TBC1D3HP0C7X1 549 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 CD27P26842 260 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 CASP14P31944 242 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 C21orf59P57076 290 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 PIGHQ14442 188 aaPredicted RBP12.6□□□□□ -0.39
CBWD3-208ENST00000612050 PPM1JQ5JR12 505 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 CCDC122Q5T0U0 273 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 ERMARDQ5T6L9 678 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 TBC1D3GQ6DHY5 549 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 TBC1D3CQ6IPX1 549 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 C22orf39Q6P5X5 142 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 LINGO4Q6UY18 593 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.6□□□□□ -0.39
CBWD3-208ENST00000612050 PRPF39Q86UA1 669 aaKnown RBP12.6□□□□□ -0.39
CBWD3-208ENST00000612050 PSTKQ8IV42 348 aaKnown RBP12.6□□□□□ -0.39
CBWD3-208ENST00000612050 TBC1D3Q8IZP1 549 aaPredicted RBP12.6□□□□□ -0.39
CBWD3-208ENST00000612050 RTL3Q8N8U3 475 aaKnown RBP12.6□□□□□ -0.39
CBWD3-208ENST00000612050 RNF214Q8ND24 703 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 OR8K1Q8NGG5 319 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 OR52K2Q8NGK3 314 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 FRS2Q8WU20 508 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 CASKIN2Q8WXE0 1202 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 SPOCK2Q92563 424 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 FAM129BQ96TA1 746 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 NEUROG2Q9H2A3 272 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 DHX35Q9H5Z1 703 aaKnown RBP12.6□□□□□ -0.39
CBWD3-208ENST00000612050 C6orf106Q9H6K1 298 aaPredicted RBP12.6□□□□□ -0.39
CBWD3-208ENST00000612050 ZWILCHQ9H900 591 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 IL36AQ9UHA7 158 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 IP6K2Q9UHH9 426 aa12.6□□□□□ -0.39
CBWD3-208ENST00000612050 GPR179Q6PRD1 2367 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 TMEM191CA6NGB0 347 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 EEF2KO00418 725 aaKnown RBP12.59□□□□□ -0.39
CBWD3-208ENST00000612050 MAGEC1O60732 1142 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 GYPCP04921 128 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 CHRNA3P32297 505 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 ARL4AP40617 200 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 GALCP54803 685 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 SNRPD1P62314 119 aaKnown RBP12.59□□□□□ -0.39
CBWD3-208ENST00000612050 HNRNPDQ14103 355 aaKnown RBP12.59□□□□□ -0.39
CBWD3-208ENST00000612050 HADHQ16836 314 aaKnown RBP12.59□□□□□ -0.39
CBWD3-208ENST00000612050 PARP15Q460N3 678 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 MANEALQ5VSG8 457 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 ALKBH5Q6P6C2 394 aaKnown RBP12.59□□□□□ -0.39
CBWD3-208ENST00000612050 NCEH1Q6PIU2 408 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 MINDY1Q8N5J2 469 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 TMIEQ8NEW7 156 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 CTNNBL1Q8WYA6 563 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-208ENST00000612050 ARHGEF2Q92974 986 aaKnown RBP12.59□□□□□ -0.39
CBWD3-208ENST00000612050 BIRC7Q96CA5 298 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 PSMB7Q99436 277 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 ACE2Q9BYF1 805 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-208ENST00000612050 CAPN10Q9HC96 672 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 OSGEPQ9NPF4 335 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 RXFP3Q9NSD7 469 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 PCSK1NQ9UHG2 260 aa12.59□□□□□ -0.39
CBWD3-208ENST00000612050 ARHGAP42A6NI28 874 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 261.8 ms