RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 SLC5A3P53794 718 aa10.62□□□□□ -0.71
PABPC1-224ENST00000610907 YWHAHQ04917 246 aaPredicted RBP10.62□□□□□ -0.71
PABPC1-224ENST00000610907 ILF2Q12905 390 aaKnown RBP10.62□□□□□ -0.71
PABPC1-224ENST00000610907 ZRSR2Q15696 482 aaKnown RBP10.62□□□□□ -0.71
PABPC1-224ENST00000610907 KCNA10Q16322 511 aa10.62□□□□□ -0.71
PABPC1-224ENST00000610907 NFE2Q16621 373 aaPredicted RBP10.62□□□□□ -0.71
PABPC1-224ENST00000610907 TRMT5Q32P41 509 aaKnown RBP10.62□□□□□ -0.71
PABPC1-224ENST00000610907 KHDC1Q4VXA5 237 aaKnown RBP10.62□□□□□ -0.71
PABPC1-224ENST00000610907 RABGAP1LQ5R372 815 aa10.62□□□□□ -0.71
PABPC1-224ENST00000610907 CCSAPQ6IQ19 270 aaPredicted RBP10.62□□□□□ -0.71
PABPC1-224ENST00000610907 MON1AQ86VX9 555 aa10.62□□□□□ -0.71
PABPC1-224ENST00000610907 GABPB2Q8TAK5 448 aaPredicted RBP10.62□□□□□ -0.71
PABPC1-224ENST00000610907 STMN2Q93045 179 aa10.62□□□□□ -0.71
PABPC1-224ENST00000610907 VPS39Q96JC1 886 aa10.62□□□□□ -0.71
PABPC1-224ENST00000610907 C8orf48Q96LL4 319 aa10.62□□□□□ -0.71
PABPC1-224ENST00000610907 ZNF778Q96MU6 729 aa10.62□□□□□ -0.71
PABPC1-224ENST00000610907 MYCBPQ99417 103 aaPredicted RBP10.62□□□□□ -0.71
PABPC1-224ENST00000610907 AGAP2Q99490 1192 aa10.62□□□□□ -0.71
PABPC1-224ENST00000610907 SIK2Q9H0K1 926 aa10.62□□□□□ -0.71
PABPC1-224ENST00000610907 FBXO44Q9H4M3 255 aa10.62□□□□□ -0.71
PABPC1-224ENST00000610907 NMRAL1Q9HBL8 299 aa10.62□□□□□ -0.71
PABPC1-224ENST00000610907 IARS2Q9NSE4 1012 aaKnown RBP10.62□□□□□ -0.71
PABPC1-224ENST00000610907 MARCOQ9UEW3 520 aaPredicted RBP10.62□□□□□ -0.71
PABPC1-224ENST00000610907 SNX10Q9Y5X0 201 aa10.62□□□□□ -0.71
PABPC1-224ENST00000610907 PTPRDP23468 1912 aa10.62□□□□□ -0.71
PABPC1-224ENST00000610907 G3V2L1 256 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 DFFAO00273 331 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 ZNF195O14628 629 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 CIB2O75838 187 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 PAMP19021 973 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 NMBRP28336 390 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 PRDX6P30041 224 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 GRIK1P39086 918 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 IDH3AP50213 366 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 ALDH18A1P54886 795 aaKnown RBP10.61□□□□□ -0.71
PABPC1-224ENST00000610907 MLLT6P55198 1093 aaPredicted RBP10.61□□□□□ -0.71
PABPC1-224ENST00000610907 ASPHQ12797 758 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 OLIG2Q13516 323 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 ITGA9Q13797 1035 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 TRIM71Q2Q1W2 868 aaKnown RBP10.61□□□□□ -0.71
PABPC1-224ENST00000610907 FSCBQ5H9T9 825 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 MSANTD2Q6P1R3 559 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 RFWD3Q6PCD5 774 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 GLB1LQ6UWU2 654 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 CTU1Q7Z7A3 348 aaKnown RBP10.61□□□□□ -0.71
PABPC1-224ENST00000610907 CMC1Q7Z7K0 106 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 SCD5Q86SK9 330 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 ZC3HC1Q86WB0 502 aaKnown RBP10.61□□□□□ -0.71
PABPC1-224ENST00000610907 SCUBE1Q8IWY4 988 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 RTL3Q8N8U3 475 aaKnown RBP10.61□□□□□ -0.71
PABPC1-224ENST00000610907 RBM15BQ8NDT2 890 aaKnown RBP10.61□□□□□ -0.71
PABPC1-224ENST00000610907 PPHLN1Q8NEY8 458 aaKnown RBP10.61□□□□□ -0.71
PABPC1-224ENST00000610907 SCAMP5Q8TAC9 235 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 TTC8Q8TAM2 541 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 N4BP2L2Q92802 583 aaPredicted RBP10.61□□□□□ -0.71
PABPC1-224ENST00000610907 CMTM5Q96DZ9 223 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 CELF6Q96J87 481 aaKnown RBP10.61□□□□□ -0.71
PABPC1-224ENST00000610907 FCRL2Q96LA5 508 aaPredicted RBP10.61□□□□□ -0.71
PABPC1-224ENST00000610907 EBF4Q9BQW3 602 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 PRKD2Q9BZL6 878 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 UBE2OQ9C0C9 1292 aaKnown RBP10.61□□□□□ -0.71
PABPC1-224ENST00000610907 SLC39A8Q9C0K1 460 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 RGS18Q9NS28 235 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 TBC1D13Q9NVG8 400 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 STX18Q9P2W9 335 aaKnown RBP10.61□□□□□ -0.71
PABPC1-224ENST00000610907 DNAJB4Q9UDY4 337 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 PLA2G4CQ9UP65 541 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 SCML2Q9UQR0 700 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 FNDC1Q4ZHG4 1894 aaPredicted RBP10.61□□□□□ -0.71
PABPC1-224ENST00000610907 NUP205Q92621 2012 aa10.61□□□□□ -0.71
PABPC1-224ENST00000610907 PRR5-ARHGAP8B1AHC4 643 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 SLCO1B7G3V0H7 640 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 LIN7AO14910 233 aaPredicted RBP10.6□□□□□ -0.71
PABPC1-224ENST00000610907 LYPLA1O75608 230 aaPredicted RBP10.6□□□□□ -0.71
PABPC1-224ENST00000610907 PSMG1O95456 288 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 HSPA4LO95757 839 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 RPSAP08865 295 aaKnown RBP10.6□□□□□ -0.71
PABPC1-224ENST00000610907 TPH1P17752 444 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 CRABP2P29373 138 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 ADRA1AP35348 466 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 VHLP40337 213 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 MAGEA11P43364 429 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 PTDSS1P48651 473 aaKnown RBP10.6□□□□□ -0.71
PABPC1-224ENST00000610907 FLT3LGP49771 235 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 TUBP50607 506 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 NDST2P52849 883 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 FAM189BP81408 668 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 ARHGAP8P85298 464 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 SLC34A1Q06495 639 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 CACNB2Q08289 660 aaPredicted RBP10.6□□□□□ -0.71
PABPC1-224ENST00000610907 MTA1Q13330 715 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 SLC12A1Q13621 1099 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 HNRNPDQ14103 355 aaKnown RBP10.6□□□□□ -0.71
PABPC1-224ENST00000610907 KPNB1Q14974 876 aaKnown RBP10.6□□□□□ -0.71
PABPC1-224ENST00000610907 TAF11Q15544 211 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 CCDC6Q16204 474 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 TSNAXIP1Q2TAA8 658 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 PAN2Q504Q3 1202 aaKnown RBP10.6□□□□□ -0.71
PABPC1-224ENST00000610907 ACSBG2Q5FVE4 666 aa10.6□□□□□ -0.71
PABPC1-224ENST00000610907 DENND5AQ6IQ26 1287 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms