RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 ANO4Q32M45 955 aa28.54■■■□□ 2.16
CSPG5-205ENST00000610462 PCID2Q5JVF3 399 aa28.54■■■□□ 2.16
CSPG5-205ENST00000610462 FSTL4Q6MZW2 842 aa28.54■■■□□ 2.16
CSPG5-205ENST00000610462 CRLF3Q8IUI8 442 aa28.54■■■□□ 2.16
CSPG5-205ENST00000610462 IPMKQ8NFU5 416 aa28.54■■■□□ 2.16
CSPG5-205ENST00000610462 SEPT8Q92599 483 aa28.54■■■□□ 2.16
CSPG5-205ENST00000610462 RAB3IPQ96QF0 476 aaPredicted RBP28.54■■■□□ 2.16
CSPG5-205ENST00000610462 NOL6Q9H6R4 1146 aaKnown RBP28.54■■■□□ 2.16
CSPG5-205ENST00000610462 IPO11Q9UI26 975 aaKnown RBP28.54■■■□□ 2.16
CSPG5-205ENST00000610462 PROCP04070 461 aa28.53■■■□□ 2.16
CSPG5-205ENST00000610462 CPB1P15086 417 aa28.53■■■□□ 2.16
CSPG5-205ENST00000610462 RHOQP17081 205 aa28.53■■■□□ 2.16
CSPG5-205ENST00000610462 RASSF2P50749 326 aa28.53■■■□□ 2.16
CSPG5-205ENST00000610462 MPP3Q13368 585 aa28.53■■■□□ 2.16
CSPG5-205ENST00000610462 MS4A13Q5J8X5 152 aa28.53■■■□□ 2.16
CSPG5-205ENST00000610462 UMODL1-AS1Q8N2C9 162 aa28.53■■■□□ 2.16
CSPG5-205ENST00000610462 ATP6V0D2Q8N8Y2 350 aa28.53■■■□□ 2.16
CSPG5-205ENST00000610462 SPPL2BQ8TCT7 592 aa28.53■■■□□ 2.16
CSPG5-205ENST00000610462 AZIN2Q96A70 460 aa28.53■■■□□ 2.16
CSPG5-205ENST00000610462 FICDQ9BVA6 458 aa28.53■■■□□ 2.16
CSPG5-205ENST00000610462 ZNF395Q9H8N7 513 aaPredicted RBP28.53■■■□□ 2.16
CSPG5-205ENST00000610462 IARS2Q9NSE4 1012 aaKnown RBP28.53■■■□□ 2.16
CSPG5-205ENST00000610462 OLA1Q9NTK5 396 aaKnown RBP28.53■■■□□ 2.16
CSPG5-205ENST00000610462 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.53■■■□□ 2.16
CSPG5-205ENST00000610462 THAP1Q9NVV9 213 aa28.53■■■□□ 2.16
CSPG5-205ENST00000610462 PPARGC1AQ9UBK2 798 aaKnown RBP28.53■■■□□ 2.16
CSPG5-205ENST00000610462 MYLKQ15746 1914 aa28.53■■■□□ 2.16
CSPG5-205ENST00000610462 MTMR11A4FU01 709 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 CBX6O95503 412 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 PRKCGP05129 697 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 SERPINB3P29508 390 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 ADRA1AP35348 466 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 PSEN1P49768 467 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 NDST2P52849 883 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 GPR17Q13304 367 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 TRIP4Q15650 581 aaPredicted RBP28.52■■■□□ 2.16
CSPG5-205ENST00000610462 MBLAC2Q68D91 279 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 PDPK2PQ6A1A2 396 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 DENND5AQ6IQ26 1287 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 FUT10Q6P4F1 479 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 CMC1Q7Z7K0 106 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 CCDC117Q8IWD4 279 aaPredicted RBP28.52■■■□□ 2.16
CSPG5-205ENST00000610462 SLC7A6OSQ96CW6 309 aaPredicted RBP28.52■■■□□ 2.16
CSPG5-205ENST00000610462 TMEM237Q96Q45 408 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 MCMBPQ9BTE3 642 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 ZYG11BQ9C0D3 744 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 TIMM44O43615 452 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 SOAT2O75908 522 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 HAUS5O94927 633 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 ZBTB16Q05516 673 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 PKN3Q6P5Z2 889 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 ZCCHC23Q6ZST2 131 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 ARID3BQ8IVW6 561 aaPredicted RBP28.52■■■□□ 2.16
CSPG5-205ENST00000610462 PPP1R14CQ8TAE6 165 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 C20orf27Q9GZN8 174 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 ENTPD7Q9NQZ7 604 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 TLR8Q9NR97 1041 aaKnown RBP28.52■■■□□ 2.16
CSPG5-205ENST00000610462 TMEM248Q9NWD8 314 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 NSMCE4AQ9NXX6 385 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 TMEM216Q9P0N5 145 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 SLC27A5Q9Y2P5 690 aa28.52■■■□□ 2.16
CSPG5-205ENST00000610462 HNRNPCL1O60812 293 aaKnown RBP28.51■■■□□ 2.15
CSPG5-205ENST00000610462 MPOP05164 745 aa28.51■■■□□ 2.15
CSPG5-205ENST00000610462 FGF3P11487 239 aaPredicted RBP28.51■■■□□ 2.15
CSPG5-205ENST00000610462 RPL10AP62906 217 aaKnown RBP28.51■■■□□ 2.15
CSPG5-205ENST00000610462 PCLAFQ15004 111 aa28.51■■■□□ 2.15
CSPG5-205ENST00000610462 ATXN7L3BQ96GX2 97 aa28.51■■■□□ 2.15
CSPG5-205ENST00000610462 SPATA17Q96L03 361 aa28.51■■■□□ 2.15
CSPG5-205ENST00000610462 ZNF778Q96MU6 729 aa28.51■■■□□ 2.15
CSPG5-205ENST00000610462 TUBB6Q9BUF5 446 aa28.51■■■□□ 2.15
CSPG5-205ENST00000610462 DONSONQ9NYP3 566 aa28.51■■■□□ 2.15
CSPG5-205ENST00000610462 LNPEPQ9UIQ6 1025 aa28.51■■■□□ 2.15
CSPG5-205ENST00000610462 STK38LQ9Y2H1 464 aa28.51■■■□□ 2.15
CSPG5-205ENST00000610462 TBC1D4O60343 1298 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 NEBLO76041 1014 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 PSMD5Q16401 504 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 RSPO2Q6UXX9 243 aaPredicted RBP28.5■■■□□ 2.15
CSPG5-205ENST00000610462 BTN2A3PQ96KV6 586 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 NOD2Q9HC29 1040 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 COMMD8Q9NX08 183 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 HCSTQ9UBK5 93 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 BAIAP2L1Q9UHR4 511 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 C2orf71A6NGG8 1288 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 TRAFD1O14545 582 aaPredicted RBP28.5■■■□□ 2.15
CSPG5-205ENST00000610462 CHUKO15111 745 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 TBX18O95935 607 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 SMARCB1Q12824 385 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 ELAVL2Q12926 359 aaKnown RBP28.5■■■□□ 2.15
CSPG5-205ENST00000610462 TAF10Q12962 218 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 MGAT5BQ3V5L5 792 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 CCDC153Q494R4 210 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 RNF19BQ6ZMZ0 732 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 FAM43BQ6ZT52 329 aaPredicted RBP28.5■■■□□ 2.15
CSPG5-205ENST00000610462 NPAS4Q8IUM7 802 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 MAGEC3Q8TD91 643 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 FATE1Q969F0 183 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 CRISPLD1Q9H336 500 aa28.5■■■□□ 2.15
CSPG5-205ENST00000610462 FBXO6Q9NRD1 293 aaPredicted RBP28.5■■■□□ 2.15
CSPG5-205ENST00000610462 HBS1LQ9Y450 684 aaKnown RBP28.5■■■□□ 2.15
CSPG5-205ENST00000610462 TET1Q8NFU7 2136 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms