RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 TMEM245Q9H330 911 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 SUN2Q9UH99 717 aa19.77■□□□□ 0.76
SGMS1-208ENST00000608287 A0A1W2PQC6 194 aa19.76■□□□□ 0.75
SGMS1-208ENST00000608287 LRRC72A6NJI9 287 aa19.76■□□□□ 0.75
SGMS1-208ENST00000608287 F5H5T6 163 aa19.76■□□□□ 0.75
SGMS1-208ENST00000608287 SLC28A2O43868 658 aa19.76■□□□□ 0.75
SGMS1-208ENST00000608287 ATP5BP06576 529 aaKnown RBP19.76■□□□□ 0.75
SGMS1-208ENST00000608287 PABPC1P11940 636 aaKnown RBP19.76■□□□□ 0.75
SGMS1-208ENST00000608287 MMP8P22894 467 aa19.76■□□□□ 0.75
SGMS1-208ENST00000608287 CD38P28907 300 aa19.76■□□□□ 0.75
SGMS1-208ENST00000608287 NSFP46459 744 aaKnown RBP19.76■□□□□ 0.75
SGMS1-208ENST00000608287 SND1Q7KZF4 910 aaKnown RBP eCLIP19.76■□□□□ 0.75
SGMS1-208ENST00000608287 PHLDB2Q86SQ0 1253 aa19.76■□□□□ 0.75
SGMS1-208ENST00000608287 AHI1Q8N157 1196 aa19.76■□□□□ 0.75
SGMS1-208ENST00000608287 MED8Q96G25 268 aa19.76■□□□□ 0.75
SGMS1-208ENST00000608287 AGPAT1Q99943 283 aa19.76■□□□□ 0.75
SGMS1-208ENST00000608287 C11orf70Q9BRQ4 267 aa19.76■□□□□ 0.75
SGMS1-208ENST00000608287 AASDHPPTQ9NRN7 309 aa19.76■□□□□ 0.75
SGMS1-208ENST00000608287 METTL5Q9NRN9 209 aaKnown RBP19.76■□□□□ 0.75
SGMS1-208ENST00000608287 RNASEH1O60930 286 aaKnown RBP19.75■□□□□ 0.75
SGMS1-208ENST00000608287 UNGP13051 313 aaPredicted RBP19.75■□□□□ 0.75
SGMS1-208ENST00000608287 TFE3P19532 575 aaPredicted RBP19.75■□□□□ 0.75
SGMS1-208ENST00000608287 CD70P32970 193 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 FLT3P36888 993 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 CSRP3P50461 194 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 RPS14P62263 151 aaKnown RBP19.75■□□□□ 0.75
SGMS1-208ENST00000608287 FANCCQ00597 558 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 DEUP1Q05D60 604 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 CDH18Q13634 790 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 NR1I3Q14994 352 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 CLEC16AQ2KHT3 1053 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 SLC25A52Q3SY17 297 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 HS1BP3Q53T59 392 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 KCNT1Q5JUK3 1230 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 OTUD1Q5VV17 481 aaPredicted RBP19.75■□□□□ 0.75
SGMS1-208ENST00000608287 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.75■□□□□ 0.75
SGMS1-208ENST00000608287 FIBINQ8TAL6 211 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 GANCQ8TET4 914 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 TBCBQ99426 244 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 DPH1Q9BZG8 443 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 WDCPQ9H6R7 721 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 ERVMER34-1Q9H9K5 563 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 PIGVQ9NUD9 493 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 TMEM59LQ9UK28 342 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 MYO6Q9UM54 1294 aa19.75■□□□□ 0.75
SGMS1-208ENST00000608287 MAGEC1O60732 1142 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 LUC7L3O95232 432 aaKnown RBP19.74■□□□□ 0.75
SGMS1-208ENST00000608287 F9P00740 461 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 NTRK1P04629 796 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 IGHV4-34P06331 123 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 CLDN6P56747 220 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 ERVPABLB-1P60509 514 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 CENPCQ03188 943 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 MTA1Q13330 715 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 ARHGAP40Q5TG30 622 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 MBLAC2Q68D91 279 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 KIAA0907Q7Z7F0 614 aaPredicted RBP19.74■□□□□ 0.75
SGMS1-208ENST00000608287 ADIPOR2Q86V24 386 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 CYB5D2Q8WUJ1 264 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 KCNE4Q8WWG9 221 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 NT5C3BQ969T7 300 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 SLC6A18Q96N87 628 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 PRMT1Q99873 361 aaKnown RBP19.74■□□□□ 0.75
SGMS1-208ENST00000608287 ORAI3Q9BRQ5 295 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 ADAM22Q9P0K1 906 aa19.74■□□□□ 0.75
SGMS1-208ENST00000608287 PLXNA2O75051 1894 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 LRRC53A6NM62 1247 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 CBX4O00257 560 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 POLR2EP19388 210 aaKnown RBP19.73■□□□□ 0.75
SGMS1-208ENST00000608287 ACP1P24666 158 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 RXRGP48443 463 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 CXCR3P49682 368 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 UBASH3AP57075 661 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 VAC14Q08AM6 782 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 ASIC2Q16515 512 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 BRMS1LQ5PSV4 323 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 RABGAP1LQ5R372 815 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 TRNP1Q6NT89 227 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 IRF2BP2Q7Z5L9 587 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 EMC1Q8N766 993 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 SNRNP27Q8WVK2 155 aaKnown RBP19.73■□□□□ 0.75
SGMS1-208ENST00000608287 PGAP3Q96FM1 320 aaPredicted RBP19.73■□□□□ 0.75
SGMS1-208ENST00000608287 CFAP57Q96MR6 1250 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 TKTL2Q9H0I9 626 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 SIK2Q9H0K1 926 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 PRSS16Q9NQE7 514 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 PAXBP1Q9Y5B6 917 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 HS3ST4Q9Y661 456 aa19.73■□□□□ 0.75
SGMS1-208ENST00000608287 FAM47DPA6NHR8 397 aa19.72■□□□□ 0.75
SGMS1-208ENST00000608287 PAGE1O75459 146 aa19.72■□□□□ 0.75
SGMS1-208ENST00000608287 DXOO77932 396 aaKnown RBP19.72■□□□□ 0.75
SGMS1-208ENST00000608287 ADCY5O95622 1261 aa19.72■□□□□ 0.75
SGMS1-208ENST00000608287 CALB1P05937 261 aa19.72■□□□□ 0.75
SGMS1-208ENST00000608287 DLDP09622 509 aaKnown RBP19.72■□□□□ 0.75
SGMS1-208ENST00000608287 TNFAIP3P21580 790 aa19.72■□□□□ 0.75
SGMS1-208ENST00000608287 GGCXP38435 758 aa19.72■□□□□ 0.75
SGMS1-208ENST00000608287 INSM1Q01101 510 aaPredicted RBP19.72■□□□□ 0.75
SGMS1-208ENST00000608287 PTP4A2Q12974 167 aa19.72■□□□□ 0.75
SGMS1-208ENST00000608287 AUHQ13825 339 aaKnown RBP19.72■□□□□ 0.75
SGMS1-208ENST00000608287 FSCBQ5H9T9 825 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms