RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 TDRPQ86YL5 185 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 FAM217AQ8IXS0 508 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 MPP5Q8N3R9 675 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 RIBC1Q8N443 379 aaPredicted RBP21.99■■□□□ 1.11
USP6NL-204ENST00000606752 CFAP36Q96G28 342 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 CASS4Q9NQ75 786 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 ZDHHC7Q9NXF8 308 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 LGALS13Q9UHV8 139 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 SH3BP1Q9Y3L3 701 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 NYNRINQ9P2P1 1898 aaKnown RBP21.99■■□□□ 1.11
USP6NL-204ENST00000606752 A0A0D9SEW6 157 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 ILVBLA1L0T0 632 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 GFRA2O00451 464 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 SESN2P58004 480 aaPredicted RBP21.99■■□□□ 1.11
USP6NL-204ENST00000606752 SLC10A7Q0GE19 358 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 KLHL38Q2WGJ6 581 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 GPR158Q5T848 1215 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 NAPEPLDQ6IQ20 393 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 CCNJLQ8IV13 435 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 TMA16Q96EY4 203 aaKnown RBP21.99■■□□□ 1.11
USP6NL-204ENST00000606752 XPO6Q96QU8 1125 aaKnown RBP21.99■■□□□ 1.11
USP6NL-204ENST00000606752 UBP1Q9NZI7 540 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 CFAP97Q9P2B7 532 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 SLC24A2Q9UI40 661 aa21.99■■□□□ 1.11
USP6NL-204ENST00000606752 OBSL1O75147 1896 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.98■■□□□ 1.11
USP6NL-204ENST00000606752 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.98■■□□□ 1.11
USP6NL-204ENST00000606752 TCRBV9S1A1TA0A576 114 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 CCDC85CA6NKD9 419 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 POC1B-GALNT4F8VUJ3 575 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 AP3B1O00203 1094 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 RHOCP08134 193 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 MGAT1P26572 445 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 GCAP28676 217 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 ATP5DP30049 168 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 GEMIN4P57678 1058 aaKnown RBP21.98■■□□□ 1.11
USP6NL-204ENST00000606752 RASA2Q15283 850 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 LINC00523Q86TU6 105 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 RBM23Q86U06 439 aaKnown RBP21.98■■□□□ 1.11
USP6NL-204ENST00000606752 OR52K2Q8NGK3 314 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 OR52K1Q8NGK4 314 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 SPATA22Q8NHS9 363 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 TCEAL4Q96EI5 215 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 STAMBPL1Q96FJ0 436 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 ZNF599Q96NL3 588 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 CYTH2Q99418 400 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 PBX4Q9BYU1 374 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 CERS4Q9HA82 394 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 EURLQ9NYK6 297 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 CTNNAL1Q9UBT7 734 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 ARHGAP26Q9UNA1 814 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 HCFC2Q9Y5Z7 792 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 CHD7Q9P2D1 2997 aa21.98■■□□□ 1.11
USP6NL-204ENST00000606752 SOBPA7XYQ1 873 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 SCAMP3O14828 347 aaKnown RBP21.97■■□□□ 1.11
USP6NL-204ENST00000606752 USP12O75317 370 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 MOSPD3O75425 235 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 STX2P32856 288 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 GEMP55040 296 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 ARHGAP15Q53QZ3 475 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 IL31Q6EBC2 164 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 ELMSAN1Q6PJG2 1045 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 KDM7AQ6ZMT4 941 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 UNC5AQ6ZN44 842 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.97■■□□□ 1.11
USP6NL-204ENST00000606752 HJURPQ8NCD3 748 aaPredicted RBP21.97■■□□□ 1.11
USP6NL-204ENST00000606752 ARNTL2Q8WYA1 636 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 NAT9Q9BTE0 207 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 PRKD2Q9BZL6 878 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 SLC25A51Q9H1U9 297 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 TASP1Q9H6P5 420 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 PLAC1Q9HBJ0 212 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 NT5MQ9NPB1 228 aa21.97■■□□□ 1.11
USP6NL-204ENST00000606752 PIH1D1Q9NWS0 290 aaKnown RBP21.97■■□□□ 1.11
USP6NL-204ENST00000606752 TYW5A2RUC4 315 aaKnown RBP21.96■■□□□ 1.11
USP6NL-204ENST00000606752 LEFTY2O00292 366 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 TBL1XO60907 577 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 MT-CYBP00156 380 aaPredicted RBP21.96■■□□□ 1.11
USP6NL-204ENST00000606752 POU2F2P09086 479 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 HPDP32754 393 aaPredicted RBP21.96■■□□□ 1.11
USP6NL-204ENST00000606752 GABPB1Q06547 395 aaPredicted RBP21.96■■□□□ 1.11
USP6NL-204ENST00000606752 OLIG2Q13516 323 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 LBRQ14739 615 aaKnown RBP21.96■■□□□ 1.11
USP6NL-204ENST00000606752 TEAD2Q15562 447 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 TMCO4Q5TGY1 634 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 CASC4Q6P4E1 433 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 CMTM8Q8IZV2 173 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 ARFGAP2Q8N6H7 521 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 DNAAF3Q8N9W5 541 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 TTC16Q8NEE8 873 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 OR7D4Q8NG98 312 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 PDFQ9HBH1 243 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 BFARQ9NZS9 450 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 KDELR3O43731 214 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 HOXD9P28356 352 aaPredicted RBP21.96■■□□□ 1.11
USP6NL-204ENST00000606752 AVPR1AP37288 418 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 ETFBP38117 255 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 CXorf57Q6NSI4 855 aaKnown RBP21.96■■□□□ 1.11
USP6NL-204ENST00000606752 ZNF783Q6ZMS7 281 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 CPXM2Q8N436 756 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms