RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 GABRG2P18507 467 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 CTNNA2P26232 953 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 CNR2P34972 360 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 SERPINH1P50454 418 aaKnown RBP14.17□□□□□ -0.14
RNF40-212ENST00000602784 COPS2P61201 443 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 PAFAH1B3Q15102 231 aaKnown RBP14.17□□□□□ -0.14
RNF40-212ENST00000602784 DLG2Q15700 870 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 INO80DQ53TQ3 878 aaPredicted RBP14.17□□□□□ -0.14
RNF40-212ENST00000602784 C9orf64Q5T6V5 341 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 ANO7Q6IWH7 933 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 PEX26Q7Z412 305 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 PLPP6Q8IY26 295 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 ATP11CQ8NB49 1132 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 OR2T3Q8NH03 318 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 EXD1Q8NHP7 514 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 MRGPRX1Q96LB2 322 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 AMFRQ9UKV5 643 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 RAD54BQ9Y620 910 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 NUP205Q92621 2012 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 H0Y858 1186 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 PRAMEF11O60813 436 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 SIN3BO75182 1162 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 CD160O95971 181 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 TNNT1P13805 278 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 ZFXP17010 805 aaPredicted RBP14.16□□□□□ -0.14
RNF40-212ENST00000602784 CDKN2BP42772 138 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 NUMBP49757 651 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 PEX5P50542 639 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 PAPOLAP51003 745 aaKnown RBP14.16□□□□□ -0.14
RNF40-212ENST00000602784 COPAP53621 1224 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 ZBTB16Q05516 673 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 ELAVL3Q14576 367 aaKnown RBP14.16□□□□□ -0.14
RNF40-212ENST00000602784 ACCSLQ4AC99 568 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 SLC9A4Q6AI14 798 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 ZC3H14Q6PJT7 736 aaKnown RBP14.16□□□□□ -0.14
RNF40-212ENST00000602784 LINGO4Q6UY18 593 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 PCDH20Q8N6Y1 951 aaKnown RBP14.16□□□□□ -0.14
RNF40-212ENST00000602784 PQLC3Q8N755 202 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 ZNF366Q8N895 744 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 MDGA1Q8NFP4 955 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 HMGB4Q8WW32 186 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 PTPRN2Q92932 1015 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 RBM41Q96IZ5 413 aaKnown RBP14.16□□□□□ -0.14
RNF40-212ENST00000602784 CELF6Q96J87 481 aaKnown RBP14.16□□□□□ -0.14
RNF40-212ENST00000602784 MAK16Q9BXY0 300 aaKnown RBP14.16□□□□□ -0.14
RNF40-212ENST00000602784 MKRN2Q9H000 416 aaKnown RBP14.16□□□□□ -0.14
RNF40-212ENST00000602784 RSPH9Q9H1X1 276 aaPredicted RBP14.16□□□□□ -0.14
RNF40-212ENST00000602784 EFR3BQ9Y2G0 817 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 CAPN6Q9Y6Q1 641 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 WDFY4Q6ZS81 3184 aa14.16□□□□□ -0.14
RNF40-212ENST00000602784 K7ERQ8 282 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 ALOX15BO15296 676 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 ZSCAN12O43309 604 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 SMAD6O43541 496 aaKnown RBP14.15□□□□□ -0.14
RNF40-212ENST00000602784 RNASEH1O60930 286 aaKnown RBP14.15□□□□□ -0.14
RNF40-212ENST00000602784 LILRB5O75023 590 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 NDUFV2P19404 249 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 MARCKSL1P49006 195 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 FNTBP49356 437 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 RWDD2BP57060 319 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 IL10RBQ08334 325 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 DMWDQ09019 674 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 BYSLQ13895 437 aaKnown RBP14.15□□□□□ -0.14
RNF40-212ENST00000602784 TFDP2Q14188 446 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 TFDP3Q5H9I0 405 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 TMCO4Q5TGY1 634 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 NCBP2-AS2Q69YL0 99 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 HEATR6Q6AI08 1181 aaKnown RBP14.15□□□□□ -0.14
RNF40-212ENST00000602784 MFSD7Q6UXD7 560 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 SPOCD1Q6ZMY3 1216 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 ZNF354CQ86Y25 554 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 TMPRSS6Q8IU80 811 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 UBL4BQ8N7F7 174 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 KRT35Q92764 455 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 RNF25Q96BH1 459 aaPredicted RBP14.15□□□□□ -0.14
RNF40-212ENST00000602784 CCDC114Q96M63 670 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 ZNF830Q96NB3 372 aaPredicted RBP14.15□□□□□ -0.14
RNF40-212ENST00000602784 ZNF599Q96NL3 588 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 FAM129BQ96TA1 746 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 PDFQ9HBH1 243 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 LZTFL1Q9NQ48 299 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 BCCIPQ9P287 314 aaKnown RBP eCLIP14.15□□□□□ -0.14
RNF40-212ENST00000602784 IPO11Q9UI26 975 aaKnown RBP14.15□□□□□ -0.14
RNF40-212ENST00000602784 SCML1Q9UN30 329 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 MFHAS1Q9Y4C4 1052 aa14.15□□□□□ -0.14
RNF40-212ENST00000602784 FARP1Q9Y4F1 1045 aaPredicted RBP14.15□□□□□ -0.14
RNF40-212ENST00000602784 DFFAO00273 331 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 MCF2LO15068 1137 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 ZNF217O75362 1048 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 ZNF821O75541 412 aaPredicted RBP14.14□□□□□ -0.15
RNF40-212ENST00000602784 VAV1P15498 845 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 PTPN7P35236 360 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 PXNP49023 591 aaPredicted RBP14.14□□□□□ -0.15
RNF40-212ENST00000602784 GALNT2Q10471 571 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 RFTN1Q14699 578 aaPredicted RBP14.14□□□□□ -0.15
RNF40-212ENST00000602784 PPP2R5EQ16537 467 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 USP39Q53GS9 565 aaKnown RBP14.14□□□□□ -0.15
RNF40-212ENST00000602784 ZNF776Q68DI1 518 aaPredicted RBP14.14□□□□□ -0.15
RNF40-212ENST00000602784 C22orf39Q6P5X5 142 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 DSG4Q86SJ6 1040 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms