RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	PDIA4	P13667	645 aa	Known RBP	11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	TACR2	P21452	398 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	UGT1A5	P35504	534 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	AFM	P43652	599 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	RGS7	P49802	495 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	INHBC	P55103	352 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	CYP4F2	P78329	520 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	FOXK1	P85037	733 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	ENPEP	Q07075	957 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	NNT	Q13423	1086 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	SERINC3	Q13530	473 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	SLC12A1	Q13621	1099 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	NR0B2	Q15466	257 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	DLG2	Q15700	870 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	RAP1GAP2	Q684P5	730 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	KYAT3	Q6YP21	454 aa	Known RBP	11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	INTS8	Q75QN2	995 aa	Known RBP	11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	C14orf80	Q86SX3	495 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	VASH2	Q86V25	355 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	UBR7	Q8N806	425 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	SLC35F5	Q8WV83	523 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	IRGQ	Q8WZA9	623 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	PRMT1	Q99873	361 aa	Known RBP	11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	ZSWIM1	Q9BR11	485 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	IGSF5	Q9NSI5	407 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	NCKIPSD	Q9NZQ3	722 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	HESX1	Q9UBX0	185 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	MTMR6	Q9Y217	621 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	TRAF3IP3	Q9Y228	551 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	FBN2	P35556	2912 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	ABCA12	Q86UK0	2595 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	RIOK3	O14730	519 aa	Known RBP	11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	TPP1	O14773	563 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	PPP6R2	O75170	966 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	GCAT	O75600	419 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	LIPC	P11150	499 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	HGF	P14210	728 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	PDC	P20941	246 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	NNMT	P40261	264 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	SULT2A1	Q06520	285 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	EIF2B5	Q13144	721 aa	Known RBP	11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	STK38	Q15208	465 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	IGFBP7	Q16270	282 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	NFIL3	Q16649	462 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	SKIDA1	Q1XH10	827 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	C4orf17	Q53FE4	359 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	KRT39	Q6A163	491 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	HIST2H2BC	Q6DN03	193 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	TAC4	Q86UU9	113 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	PARG	Q86W56	976 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	DCP2	Q8IU60	420 aa	Known RBP	11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	CCAR2	Q8N163	923 aa	Known RBP	11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	TFAP2B	Q92481	460 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	ERCC4	Q92889	916 aa	Predicted RBP	11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	SERPINB11	Q96P15	392 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	CCDC3	Q9BQI4	270 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	TCEAL2	Q9H3H9	227 aa	Predicted RBP	11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	WDR70	Q9NW82	654 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	RAB20	Q9NX57	234 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	SEPT3	Q9UH03	358 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	RABGEF1	Q9UJ41	708 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	NAALADL1	Q9UQQ1	740 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	OR51B4	Q9Y5P0	310 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	HS3ST3A1	Q9Y663	406 aa		11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	PRRC2C	Q9Y520	2896 aa	Known RBP	11.33	□□□□□ -0.6
NUP62-222	ENST00000600935	CUTA	O60888	179 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	CD19	P15391	556 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	JUND	P17535	347 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	NR2F2	P24468	414 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	GTF2H1	P32780	548 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	IRAK1	P51617	712 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	SPIDR	Q14159	915 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	ACCSL	Q4AC99	568 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	SYPL2	Q5VXT5	272 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	LCLAT1	Q6UWP7	414 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	RAB11FIP2	Q7L804	512 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	CHSY1	Q86X52	802 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	PTRH1	Q86Y79	214 aa	Known RBP	11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	FAM186B	Q8IYM0	893 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	RBFA	Q8N0V3	343 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	FBXO39	Q8N4B4	442 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	SH2D3C	Q8N5H7	860 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	CCDC150	Q8NCX0	1101 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	FBXL13	Q8NEE6	735 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	OR2A12	Q8NGT7	310 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	WDR48	Q8TAF3	677 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	FAM174A	Q8TBP5	190 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	LMX1A	Q8TE12	382 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	KLF6	Q99612	283 aa	Predicted RBP	11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	FEM1A	Q9BSK4	669 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	FOXP3	Q9BZS1	431 aa		11.32	□□□□□ -0.6
NUP62-222	ENST00000600935	UNC13C	Q8NB66	2214 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935		H3BM21	787 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms