RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 CCDC50Q8IVM0 306 aa11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 MFN1Q8IWA4 741 aa11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 SPEM1Q8N4L4 309 aa11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 FAM160A2Q8N612 972 aaPredicted RBP11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 PLD5Q8N7P1 536 aa11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 ACTRT1Q8TDG2 376 aa11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 WFIKKN2Q8TEU8 576 aa11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 MAIP1Q8WWC4 291 aa11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 TUBB2BQ9BVA1 445 aa11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 FRMD8P1Q9BZ68 369 aaPredicted RBP11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 BRD8Q9H0E9 1235 aa11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 MAGEH1Q9H213 219 aa11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 NOL6Q9H6R4 1146 aaKnown RBP11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 LRRC19Q9H756 370 aa11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 DNAI1Q9UI46 699 aa11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 OR51B4Q9Y5P0 310 aa11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 DSPP15924 2871 aaKnown RBP11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 ATRXP46100 2492 aa11.93□□□□□ -0.5
CHMP2A-207ENST00000600804 ADAMTS9Q9P2N4 1935 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 PI4KAP42356 2102 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 PKD1L2Q7Z442 2459 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 SPECC1L-ADORA2AF8WAN1 911 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 H0Y626 953 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 APOC4-APOC2K7ER74 178 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 CST8O60676 142 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 RAMP2O60895 175 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 TULP3O75386 442 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 ZNF189O75820 626 aaPredicted RBP11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 APOC2P02655 101 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 MX2P20592 715 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 HLA-FP30511 346 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 CTHP32929 405 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 OPRD1P41143 372 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 CCINQ13939 588 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 EIF4HQ15056 248 aaKnown RBP11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 CCDC6Q16204 474 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 LONP2Q86WA8 852 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 ARHGAP12Q8IWW6 846 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 PHTF2Q8N3S3 785 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 TTC13Q8NBP0 860 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 FATE1Q969F0 183 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 ALG14Q96F25 216 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 OLFM3Q96PB7 478 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 NAP1L3Q99457 506 aaPredicted RBP11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 ACE2Q9BYF1 805 aaPredicted RBP11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 NDFIP2Q9NV92 336 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 ETNK2Q9NVF9 386 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 PLK2Q9NYY3 685 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 DEC1Q9P2X7 70 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 RAB23Q9ULC3 237 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 CLEC4EQ9ULY5 219 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 ASCC3Q8N3C0 2202 aaKnown RBP11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 ITPR1Q14643 2758 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 DMXL2Q8TDJ6 3036 aa11.92□□□□□ -0.5
CHMP2A-207ENST00000600804 TIMM44O43615 452 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 RHOCP08134 193 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 KRT10P13645 584 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 GRIA2P42262 883 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 DGKGP49619 791 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 GNA12Q03113 381 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 SULT2A1Q06520 285 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 ADCY2Q08462 1091 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 GALNT2Q10471 571 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 LMAN2Q12907 356 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 ZNF211Q13398 564 aaPredicted RBP11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 XRCC4Q13426 336 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 POLD3Q15054 466 aaPredicted RBP11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 PON2Q15165 354 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 E2F5Q15329 346 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 SF3A2Q15428 464 aaKnown RBP11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 PLEKHG6Q3KR16 790 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 FSCBQ5H9T9 825 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 TFAP2DQ7Z6R9 452 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 C12orf40Q86WS4 652 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 CIR1Q86X95 450 aaPredicted RBP11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 RFX6Q8HWS3 928 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 CREG2Q8IUH2 290 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 CARNMT1Q8N4J0 409 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 NPWQ8N729 165 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 TERB1Q8NA31 727 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 DCAF4L2Q8NA75 395 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 KIF18AQ8NI77 898 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 WFDC5Q8TCV5 224 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 KCNV2Q8TDN2 545 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 ARHGEF2Q92974 986 aaKnown RBP11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 TTC17Q96AE7 1141 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 ACDQ96AP0 544 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 TSGA13Q96PP4 275 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 PNKPQ96T60 521 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 HERPUD2Q9BSE4 406 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 FEM1AQ9BSK4 669 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 DNAJC17Q9NVM6 304 aaKnown RBP11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 POLR3BQ9NW08 1133 aaPredicted RBP11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 DTLQ9NZJ0 730 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 STARD13Q9Y3M8 1113 aa11.91□□□□□ -0.5
CHMP2A-207ENST00000600804 SHROOM3Q8TF72 1996 aa11.9□□□□□ -0.5
CHMP2A-207ENST00000600804 PLXND1Q9Y4D7 1925 aa11.9□□□□□ -0.5
CHMP2A-207ENST00000600804 ZSCAN5CA6NGD5 496 aaPredicted RBP11.9□□□□□ -0.5
CHMP2A-207ENST00000600804 ARHGAP42A6NI28 874 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms