RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 NPY2RP49146 381 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 GEMP55040 296 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 ZNF177Q13360 481 aaPredicted RBP20.43■□□□□ 0.86
PNKP-214ENST00000600573 EFTUD2Q15029 972 aaKnown RBP eCLIP20.43■□□□□ 0.867e-7■■■■■ 37.5
PNKP-214ENST00000600573 MARC1Q5VT66 337 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 ARHGAP36Q6ZRI8 547 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 AGGF1Q8N302 714 aaeCLIP20.43■□□□□ 0.86
PNKP-214ENST00000600573 TEX26Q8N6G2 289 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 CNTD1Q8N815 330 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 CEP41Q9BYV8 373 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 LMAN2LQ9H0V9 348 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 ZDHHC7Q9NXF8 308 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 TTLL3Q9Y4R7 772 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 CPQQ9Y646 472 aa20.43■□□□□ 0.86
PNKP-214ENST00000600573 ZFP37Q9Y6Q3 630 aaPredicted RBP20.43■□□□□ 0.86
PNKP-214ENST00000600573 NYNRINQ9P2P1 1898 aaKnown RBP20.42■□□□□ 0.86
PNKP-214ENST00000600573 TCRBV9S1A1TA0A576 114 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 GMNCA6NCL1 334 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 GRM6O15303 877 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 CLASP2O75122 1294 aaKnown RBP20.42■□□□□ 0.86
PNKP-214ENST00000600573 KRT15P19012 456 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 GPM6BQ13491 265 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 ARHGAP15Q53QZ3 475 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 ADGRD1Q6QNK2 874 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 HTR3DQ70Z44 454 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 FAM217AQ8IXS0 508 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 BBS5Q8N3I7 341 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 SLC22A17Q8WUG5 538 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 CORO1BQ9BR76 489 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 CCDC134Q9H6E4 229 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 BFARQ9NZS9 450 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 TBC1D30Q9Y2I9 924 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 PLXNA4Q9HCM2 1894 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 CCDC85CA6NKD9 419 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 PEX11BO96011 259 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 CA3P07451 260 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 GNA12Q03113 381 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 PPARDQ03181 441 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 C9orf50Q5SZB4 431 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 Q6ZNB5 142 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 HS6ST3Q8IZP7 471 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 STAMBPL1Q96FJ0 436 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 CYP2S1Q96SQ9 504 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 SLC25A51Q9H1U9 297 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 TRABDQ9H4I3 376 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 KCNK9Q9NPC2 374 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 CASS4Q9NQ75 786 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 MAN1C1Q9NR34 630 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 VPS45Q9NRW7 570 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 NKIRAS1Q9NYS0 192 aa20.42■□□□□ 0.86
PNKP-214ENST00000600573 F5H423 210 aaPredicted RBP20.41■□□□□ 0.86
PNKP-214ENST00000600573 PRAMEF11O60813 436 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 FAM107AO95990 144 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 CKMP06732 381 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 MYL4P12829 197 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 CAMK1Q14012 370 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 RFTN1Q14699 578 aaPredicted RBP20.41■□□□□ 0.86
PNKP-214ENST00000600573 SHHQ15465 462 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 ZNF449Q6P9G9 518 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 RFWD3Q6PCD5 774 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 CCDC117Q8IWD4 279 aaPredicted RBP20.41■□□□□ 0.86
PNKP-214ENST00000600573 CPXM2Q8N436 756 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 HJURPQ8NCD3 748 aaPredicted RBP20.41■□□□□ 0.86
PNKP-214ENST00000600573 DCAKDQ8WVC6 231 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 RABEP2Q9H5N1 569 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 ARHGAP26Q9UNA1 814 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 SMG5Q9UPR3 1016 aaKnown RBP20.41■□□□□ 0.86
PNKP-214ENST00000600573 SH3BP1Q9Y3L3 701 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 MAD1L1Q9Y6D9 718 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 IKBKGQ9Y6K9 419 aa20.41■□□□□ 0.86
PNKP-214ENST00000600573 CCL16O15467 120 aa20.4■□□□□ 0.86
PNKP-214ENST00000600573 IRF1P10914 325 aa20.4■□□□□ 0.86
PNKP-214ENST00000600573 CREB1P16220 341 aa20.4■□□□□ 0.86
PNKP-214ENST00000600573 MAGEA10P43363 369 aaPredicted RBP20.4■□□□□ 0.86
PNKP-214ENST00000600573 SEC24CP53992 1094 aa20.4■□□□□ 0.86
PNKP-214ENST00000600573 MPP3Q13368 585 aa20.4■□□□□ 0.86
PNKP-214ENST00000600573 MPP7Q5T2T1 576 aa20.4■□□□□ 0.86
PNKP-214ENST00000600573 ZNF354CQ86Y25 554 aa20.4■□□□□ 0.86
PNKP-214ENST00000600573 MAB21L3Q8N8X9 362 aa20.4■□□□□ 0.86
PNKP-214ENST00000600573 GSDMBQ8TAX9 411 aa20.4■□□□□ 0.86
PNKP-214ENST00000600573 ZNF473Q8WTR7 871 aaKnown RBP20.4■□□□□ 0.86
PNKP-214ENST00000600573 SLC44A1Q8WWI5 657 aa20.4■□□□□ 0.86
PNKP-214ENST00000600573 MRRFQ96E11 262 aaKnown RBP20.4■□□□□ 0.86
PNKP-214ENST00000600573 SMC6Q96SB8 1091 aa20.4■□□□□ 0.86
PNKP-214ENST00000600573 SMPD4Q9NXE4 827 aa20.4■□□□□ 0.86
PNKP-214ENST00000600573 A0A1W2PRU2 124 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 ZNF197O14709 1029 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 PRPF4O43172 522 aaKnown RBP eCLIP20.39■□□□□ 0.866e-7■■■■□ 23.2
PNKP-214ENST00000600573 KDELR3O43731 214 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 GREM1O60565 184 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 RHOCP08134 193 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 INHBAP08476 426 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 MYOGP15173 224 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 PGAM1P18669 254 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 PRKCHP24723 683 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 OXCT1P55809 520 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 CYP4F8P98187 520 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 CDH17Q12864 832 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 FRG1Q14331 258 aaKnown RBP20.39■□□□□ 0.86
PNKP-214ENST00000600573 KBTBD12Q3ZCT8 623 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms