RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SLC9A4Q6AI14 798 aa19.29■□□□□ 0.68
CCDC9-205ENST00000600117 TMCO3Q6UWJ1 677 aa19.29■□□□□ 0.68
CCDC9-205ENST00000600117 ARHGEF2Q92974 986 aaKnown RBP19.29■□□□□ 0.68
CCDC9-205ENST00000600117 TTC17Q96AE7 1141 aa19.29■□□□□ 0.68
CCDC9-205ENST00000600117 TRIM44Q96DX7 344 aaPredicted RBP19.29■□□□□ 0.68
CCDC9-205ENST00000600117 HERPUD2Q9BSE4 406 aa19.29■□□□□ 0.68
CCDC9-205ENST00000600117 MAGEH1Q9H213 219 aa19.29■□□□□ 0.68
CCDC9-205ENST00000600117 ELOVL2Q9NXB9 296 aa19.29■□□□□ 0.68
CCDC9-205ENST00000600117 DONSONQ9NYP3 566 aa19.29■□□□□ 0.68
CCDC9-205ENST00000600117 STARD13Q9Y3M8 1113 aa19.29■□□□□ 0.68
CCDC9-205ENST00000600117 MUC22E2RYF6 1773 aaPredicted RBP19.29■□□□□ 0.68
CCDC9-205ENST00000600117 NUP205Q92621 2012 aa19.29■□□□□ 0.68
CCDC9-205ENST00000600117 HRO43593 1189 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 KRT10P13645 584 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 PTPN7P35236 360 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 ACVRL1P37023 503 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 NUMBP49757 651 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 DNA2P51530 1060 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 NDST2P52849 883 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 YBEYP58557 167 aaPredicted RBP19.28■□□□□ 0.68
CCDC9-205ENST00000600117 COPS2P61201 443 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 ZNF211Q13398 564 aaPredicted RBP19.28■□□□□ 0.68
CCDC9-205ENST00000600117 EIF4HQ15056 248 aaKnown RBP19.28■□□□□ 0.68
CCDC9-205ENST00000600117 PAFAH1B3Q15102 231 aaKnown RBP19.28■□□□□ 0.68
CCDC9-205ENST00000600117 RPS6KA1Q15418 735 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 FBXO43Q4G163 708 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 ODF2Q5BJF6 829 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 TFDP3Q5H9I0 405 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 DGKKQ5KSL6 1271 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 N4BP2L1Q5TBK1 243 aaPredicted RBP19.28■□□□□ 0.68
CCDC9-205ENST00000600117 EMC10Q5UCC4 262 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 IL31Q6EBC2 164 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 AADACL2Q6P093 401 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 TP53INP2Q8IXH6 220 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 LZTR1Q8N653 840 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 HMCESQ96FZ2 354 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 CELF6Q96J87 481 aaKnown RBP19.28■□□□□ 0.68
CCDC9-205ENST00000600117 ACE2Q9BYF1 805 aaPredicted RBP19.28■□□□□ 0.68
CCDC9-205ENST00000600117 SLC39A8Q9C0K1 460 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 MUC3BQ9H195 1237 aa19.28■□□□□ 0.68
CCDC9-205ENST00000600117 NBEAQ8NFP9 2946 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 RASA4BC9J798 803 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 RASA4O43374 803 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 TIMM44O43615 452 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 MFSD11O43934 449 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 SNAP91O60641 907 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 ZMPSTE24O75844 475 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 CTSOP43234 321 aaPredicted RBP19.27■□□□□ 0.68
CCDC9-205ENST00000600117 LIMK1P53667 647 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 SATB1Q01826 763 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 ADCY2Q08462 1091 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 POLD3Q15054 466 aaPredicted RBP19.27■□□□□ 0.68
CCDC9-205ENST00000600117 LLGL1Q15334 1064 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 PARP15Q460N3 678 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 EGFLAMQ63HQ2 1017 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 NUDT18Q6ZVK8 323 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 RFX6Q8HWS3 928 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 CCDC50Q8IVM0 306 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 PLD5Q8N7P1 536 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 DCAF4L2Q8NA75 395 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 NETO2Q8NC67 525 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 SORCS1Q8WY21 1168 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 CIPCQ9C0C6 399 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 PRDM16Q9HAZ2 1276 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 VPS28Q9UK41 221 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 JRKLQ9Y4A0 524 aa19.27■□□□□ 0.68
CCDC9-205ENST00000600117 NYNRINQ9P2P1 1898 aaKnown RBP19.26■□□□□ 0.67
CCDC9-205ENST00000600117 PKD1L2Q7Z442 2459 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 POLR2EP19388 210 aaKnown RBP19.26■□□□□ 0.67
CCDC9-205ENST00000600117 GLDCP23378 1020 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 ETFBP38117 255 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 SEC13P55735 322 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 LRRC32Q14392 662 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 Q6ZS52 159 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 SPEM1Q8N4L4 309 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 USP33Q8TEY7 942 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 CYB5D2Q8WUJ1 264 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 MRGPRX3Q96LB0 322 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 SPON2Q9BUD6 331 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 ATP13A1Q9HD20 1204 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 VPS51Q9UID3 782 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 EFR3BQ9Y2G0 817 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 MYO18AQ92614 2054 aaKnown RBP19.26■□□□□ 0.67
CCDC9-205ENST00000600117 ATG2BQ96BY7 2078 aa19.26■□□□□ 0.67
CCDC9-205ENST00000600117 CHURC1-FNTBB4DL54 471 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 ENC1O14682 589 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 APOL1O14791 398 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 RNF40O75150 1001 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 PAPSS2O95340 614 aaPredicted RBP19.25■□□□□ 0.67
CCDC9-205ENST00000600117 ASLP04424 464 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 DLDP09622 509 aaKnown RBP19.25■□□□□ 0.67
CCDC9-205ENST00000600117 HNRNPLP14866 589 aaKnown RBP eCLIP19.25■□□□□ 0.67
CCDC9-205ENST00000600117 SERPINB6P35237 376 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 FNTBP49356 437 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 PAPOLAP51003 745 aaKnown RBP19.25■□□□□ 0.67
CCDC9-205ENST00000600117 GNG11P61952 73 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 MRPS21P82921 87 aaKnown RBP19.25■□□□□ 0.67
CCDC9-205ENST00000600117 GBE1Q04446 702 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 SLC10A2Q12908 348 aaPredicted RBP19.25■□□□□ 0.67
CCDC9-205ENST00000600117 SERINC3Q13530 473 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms