RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 IMPACTQ9P2X3 320 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 FCF1Q9Y324 198 aaKnown RBP15.54■□□□□ 0.08
LIG1-219ENST00000600055 PCDHA13Q9Y5I0 950 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 EPN1Q9Y6I3 576 aaPredicted RBP15.54■□□□□ 0.08
LIG1-219ENST00000600055 GPR179Q6PRD1 2367 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 H3BRJ5 948 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 KDELR3O43731 214 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 RNASEH1O60930 286 aaKnown RBP15.53■□□□□ 0.08
LIG1-219ENST00000600055 MTA2O94776 668 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 NDUFA10O95299 355 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 IGLV3-19P01714 112 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 CD48P09326 243 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 TGM1P22735 817 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 AMPD1P23109 780 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 HCAR3P49019 387 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 CREB5Q02930 508 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 MMRN1Q13201 1228 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 SERINC3Q13530 473 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 ELAVL3Q14576 367 aaKnown RBP15.53■□□□□ 0.08
LIG1-219ENST00000600055 SPA17Q15506 151 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 CST6Q15828 149 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 HADHQ16836 314 aaKnown RBP15.53■□□□□ 0.08
LIG1-219ENST00000600055 C22orf39Q6P5X5 142 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 TMEM139Q8IV31 216 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 SLC41A1Q8IVJ1 513 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 TP53INP2Q8IXH6 220 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 RHOT2Q8IXI1 618 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 NPWQ8N729 165 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 OR2A12Q8NGT7 310 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 LOXL4Q96JB6 756 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 CSPG4P5Q96PW8 444 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 GPR174Q9BXC1 333 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 SLC39A8Q9C0K1 460 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 PABPC3Q9H361 631 aaKnown RBP15.53■□□□□ 0.08
LIG1-219ENST00000600055 LRRC19Q9H756 370 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 ETNK2Q9NVF9 386 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 KLHL11Q9NVR0 708 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 SERGEFQ9UGK8 458 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 SARDHQ9UL12 918 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 HPCAL4Q9UM19 191 aa15.53■□□□□ 0.08
LIG1-219ENST00000600055 ZFHX2Q9C0A1 2572 aaPredicted RBP15.53■□□□□ 0.08
LIG1-219ENST00000600055 A0A1W2PP55 124 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 RNF103O00237 685 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 PLK4O00444 970 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 BUB1O43683 1085 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 NDUFS2O75306 463 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 IL1BP01584 269 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 CTSLP07711 333 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 SLC8A1P32418 973 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 ACSL1P33121 698 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 MAN1A1P33908 653 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 ARL4AP40617 200 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 DNA2P51530 1060 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 ARSEP51690 589 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 CLCN6P51797 869 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 CDH6P55285 790 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 YBEYP58557 167 aaPredicted RBP15.52■□□□□ 0.08
LIG1-219ENST00000600055 ZBTB16Q05516 673 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 SLC20A2Q08357 652 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 KRT81Q14533 505 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 POM121L1PQ3SYA9 428 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 PARP15Q460N3 678 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 ARHGAP12Q8IWW6 846 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 KIAA2013Q8IYS2 634 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 AADATQ8N5Z0 425 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 CHST14Q8NCH0 376 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 GANCQ8TET4 914 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 OR8D1Q8WZ84 308 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 TSC1Q92574 1164 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 BAG1Q99933 345 aaPredicted RBP15.52■□□□□ 0.08
LIG1-219ENST00000600055 REXO2Q9Y3B8 237 aaKnown RBP15.52■□□□□ 0.08
LIG1-219ENST00000600055 HYOU1Q9Y4L1 999 aa15.52■□□□□ 0.08
LIG1-219ENST00000600055 ATXN2Q99700 1313 aaKnown RBP15.51■□□□□ 0.07
LIG1-219ENST00000600055 BCLAF3A2AJT9 711 aaKnown RBP15.51■□□□□ 0.07
LIG1-219ENST00000600055 RCCD1A6NED2 376 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 J3KR12 359 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 MCF2LO15068 1137 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 ITPKAP23677 461 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 IL4RP24394 825 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 OXTRP30559 389 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 MPLP40238 635 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 ARHGAP25P42331 645 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 NOP2P46087 812 aaKnown RBP15.51■□□□□ 0.07
LIG1-219ENST00000600055 PAPOLAP51003 745 aaKnown RBP15.51■□□□□ 0.07
LIG1-219ENST00000600055 ZNF135P52742 658 aaPredicted RBP15.51■□□□□ 0.07
LIG1-219ENST00000600055 NDST2P52849 883 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 ZNF33AQ06730 810 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 TCEAL1Q15170 157 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 TTC31Q49AM3 519 aaPredicted RBP15.51■□□□□ 0.07
LIG1-219ENST00000600055 LYSMD4Q5XG99 296 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 AFMIDQ63HM1 303 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 DPY19L3Q6ZPD9 716 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 ARHGAP36Q6ZRI8 547 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 CYP2U1Q7Z449 544 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 ABCA7Q8IZY2 2146 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 ACRBPQ8NEB7 543 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 FAM71BQ8TC56 605 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 PIGKQ92643 395 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 HSPA12BQ96MM6 686 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 TM6SF2Q9BZW4 377 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms