RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 PTPN1P18031 435 aaKnown RBP11.42□□□□□ -0.58
ZNF544-213ENST00000599227 GABRB2P47870 512 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 SNX16P57768 344 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 FLOT2Q14254 428 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 TCEA2Q15560 299 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 FSCN1Q16658 493 aaKnown RBP11.42□□□□□ -0.58
ZNF544-213ENST00000599227 OR52E8Q6IFG1 317 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 FSTL4Q6MZW2 842 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 MAVSQ7Z434 540 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 RSPH1Q8WYR4 309 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 ESAMQ96AP7 390 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 RCN3Q96D15 328 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 ELMO2Q96JJ3 720 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 ZIC5Q96T25 663 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 NPAS2Q99743 824 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 ZNF670Q9BS34 389 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 ABHD16BQ9H3Z7 469 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 PLK2Q9NYY3 685 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 ADAMTS5Q9UNA0 930 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 POLR2AP24928 1970 aaKnown RBP11.42□□□□□ -0.58
ZNF544-213ENST00000599227 MOXD2PA6NHM9 499 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 ZBTB24O43167 697 aaPredicted RBP11.42□□□□□ -0.58
ZNF544-213ENST00000599227 MMP3P08254 477 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 HDCP19113 662 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 PMLP29590 882 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 PSEN2P49810 448 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 CCL23P55773 120 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 PTPRCAPQ14761 206 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 SNX17Q15036 470 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 MAP7D1Q3KQU3 841 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 SH2D4BQ5SQS7 431 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 TMCO2Q7Z6W1 182 aaPredicted RBP11.42□□□□□ -0.58
ZNF544-213ENST00000599227 SPATA2LQ8IUW3 424 aaPredicted RBP11.42□□□□□ -0.58
ZNF544-213ENST00000599227 SREK1Q8WXA9 508 aaKnown RBP11.42□□□□□ -0.58
ZNF544-213ENST00000599227 CMTM5Q96DZ9 223 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 FICDQ9BVA6 458 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 KLHL4Q9C0H6 718 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 DNAI2Q9GZS0 605 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 DTNAQ9Y4J8 743 aa11.42□□□□□ -0.58
ZNF544-213ENST00000599227 COL2A1P02458 1487 aaPredicted RBP11.42□□□□□ -0.58
ZNF544-213ENST00000599227 SCN1AP35498 2009 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 MAGEC1O60732 1142 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 NFKB1P19838 968 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 GP5P40197 560 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 WASHC5Q12768 1159 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 MPP3Q13368 585 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 CSHL1Q14406 222 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 GK3PQ14409 553 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 ACAP1Q15027 740 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 SLC39A12Q504Y0 691 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 C10orf120Q5SQS8 335 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 C9orf57Q5W0N0 161 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 LCA5Q86VQ0 697 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 SLC41A1Q8IVJ1 513 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 RAB3IL1Q8TBN0 382 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 SLC35F5Q8WV83 523 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 MAML3Q96JK9 1138 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 GRIP2Q9C0E4 1043 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 OR12D3Q9UGF7 316 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 FETUBQ9UGM5 382 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 DCDC2Q9UHG0 476 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 ARHGAP26Q9UNA1 814 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 XPO1O14980 1071 aaKnown RBP11.41□□□□□ -0.58
ZNF544-213ENST00000599227 SPRP35270 261 aaPredicted RBP11.41□□□□□ -0.58
ZNF544-213ENST00000599227 RANBP1P43487 201 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 GPR15P49685 360 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 PRAMEP78395 509 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 IL1RL1Q01638 556 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 BST2Q10589 180 aaKnown RBP11.41□□□□□ -0.58
ZNF544-213ENST00000599227 ARL13BQ3SXY8 428 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 SLC9A4Q6AI14 798 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 PARK7Q99497 189 aaKnown RBP11.41□□□□□ -0.58
ZNF544-213ENST00000599227 GATA5Q9BWX5 397 aaPredicted RBP11.41□□□□□ -0.58
ZNF544-213ENST00000599227 PFDN4Q9NQP4 134 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 ITGA11Q9UKX5 1188 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 SEC24DO94855 1032 aaPredicted RBP11.41□□□□□ -0.58
ZNF544-213ENST00000599227 ITGAXP20702 1163 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 PROZP22891 400 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 ATICP31939 592 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 BCAT1P54687 386 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 KLF10Q13118 480 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 PRPSAP1Q14558 356 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 SGO1Q5FBB7 561 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 KCNMB4Q86W47 210 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 DENND6AQ8IWF6 608 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.41□□□□□ -0.58
ZNF544-213ENST00000599227 ARRDC4Q8NCT1 418 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 PRPF18Q99633 342 aaKnown RBP11.41□□□□□ -0.58
ZNF544-213ENST00000599227 VCX3BQ9H321 246 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 NMRAL1Q9HBL8 299 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 RBM22Q9NW64 420 aaKnown RBP eCLIP11.41□□□□□ -0.58
ZNF544-213ENST00000599227 MTMR10Q9NXD2 777 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 HCSTQ9UBK5 93 aa11.41□□□□□ -0.58
ZNF544-213ENST00000599227 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.4□□□□□ -0.58
ZNF544-213ENST00000599227 PGAM1P18669 254 aa11.4□□□□□ -0.58
ZNF544-213ENST00000599227 NMBRP28336 390 aa11.4□□□□□ -0.58
ZNF544-213ENST00000599227 CDH13P55290 713 aa11.4□□□□□ -0.58
ZNF544-213ENST00000599227 CCNIQ14094 377 aa11.4□□□□□ -0.58
ZNF544-213ENST00000599227 PITRM1Q5JRX3 1037 aa11.4□□□□□ -0.58
ZNF544-213ENST00000599227 KYAT3Q6YP21 454 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms