RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 CTSKP43235 329 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 TAS2R38P59533 333 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 KRT83P78385 493 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 CNTN1Q12860 1018 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 PPP1R15BQ5SWA1 713 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 ACBD5Q5T8D3 534 aaPredicted RBP13.36□□□□□ -0.27
LIG1-212ENST00000596549 WDR59Q6PJI9 974 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 IL27RAQ6UWB1 636 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 IRF2BP2Q7Z5L9 587 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 NLRP14Q86W24 1093 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 DRC7Q8IY82 874 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 ATP11CQ8NB49 1132 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 CHST14Q8NCH0 376 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 OR14C36Q8NHC7 312 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 MCEEQ96PE7 176 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 SELENOOQ9BVL4 669 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 TTYH3Q9C0H2 523 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 SEPT11Q9NVA2 429 aaKnown RBP13.36□□□□□ -0.27
LIG1-212ENST00000596549 TMEM51Q9NW97 253 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 TAS2R14Q9NYV8 317 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 PCOLCE2Q9UKZ9 415 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 BTBD3Q9Y2F9 522 aa13.36□□□□□ -0.27
LIG1-212ENST00000596549 AKAP13Q12802 2813 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 A0A1W2PR77 199 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 ILVBLA1L0T0 632 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 LRRC53A6NM62 1247 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 C1QTNF3-AMACRE9PGA6 284 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 H0Y8X5 98 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 KCNK3O14649 394 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 SLC7A4O43246 635 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 HYAL3O43820 417 aaPredicted RBP13.35□□□□□ -0.27
LIG1-212ENST00000596549 ZNF821O75541 412 aaPredicted RBP13.35□□□□□ -0.27
LIG1-212ENST00000596549 LRIG2O94898 1065 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 CD160O95971 181 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 FERP16591 822 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 ADRA1BP35368 520 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 ACVRL1P37023 503 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 SERPINH1P50454 418 aaKnown RBP13.35□□□□□ -0.27
LIG1-212ENST00000596549 CCR5P51681 352 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 CLCN6P51797 869 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 RPL7AP62424 266 aaKnown RBP13.35□□□□□ -0.27
LIG1-212ENST00000596549 RACK1P63244 317 aaKnown RBP13.35□□□□□ -0.27
LIG1-212ENST00000596549 OGDHQ02218 1023 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 GNA12Q03113 381 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 C1QBPQ07021 282 aaKnown RBP13.35□□□□□ -0.27
LIG1-212ENST00000596549 SFSWAPQ12872 951 aaKnown RBP13.35□□□□□ -0.27
LIG1-212ENST00000596549 IQCB1Q15051 598 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 TEAD4Q15561 434 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 ZNF423Q2M1K9 1284 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 PIP5KL1Q5T9C9 394 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.35□□□□□ -0.27
LIG1-212ENST00000596549 ZNF783Q6ZMS7 281 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 DSG4Q86SJ6 1040 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 NTAN1Q96AB6 310 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 ARRDC3Q96B67 414 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 SCNM1Q9BWG6 230 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 NAT10Q9H0A0 1025 aaKnown RBP13.35□□□□□ -0.27
LIG1-212ENST00000596549 TNKS2Q9H2K2 1166 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 ATP13A1Q9HD20 1204 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 ARHGAP20Q9P2F6 1191 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 USP24Q9UPU5 2620 aa13.35□□□□□ -0.27
LIG1-212ENST00000596549 CHD8Q9HCK8 2581 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 A0A1B0GTH6 734 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 SIGLEC16A6NMB1 481 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 C1QTNF9BB2RNN3 333 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 CBX4O00257 560 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 VILLO15195 856 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 ATMINO43313 823 aaPredicted RBP13.34□□□□□ -0.27
LIG1-212ENST00000596549 C1QTNF9P0C862 333 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 ZNF165P49910 485 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 IL9RQ01113 521 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 SCAPQ12770 1279 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 DNAJC24Q6P3W2 148 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 DBX2Q6ZNG2 339 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 DNAAF5Q86Y56 855 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 MCOLN2Q8IZK6 566 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 PYROXD2Q8N2H3 581 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 GRIN3AQ8TCU5 1115 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 VOPP1Q96AW1 172 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 NAP1L5Q96NT1 182 aaPredicted RBP13.34□□□□□ -0.27
LIG1-212ENST00000596549 ACE2Q9BYF1 805 aaPredicted RBP13.34□□□□□ -0.27
LIG1-212ENST00000596549 OSBPL2Q9H1P3 480 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 TMEM248Q9NWD8 314 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 TOR4AQ9NXH8 423 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 OR12D3Q9UGF7 316 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 DNAI1Q9UI46 699 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 KLK13Q9UKR3 277 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 MYO6Q9UM54 1294 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 FCF1Q9Y324 198 aaKnown RBP13.34□□□□□ -0.27
LIG1-212ENST00000596549 PCDHGB2Q9Y5G2 931 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 WASF2Q9Y6W5 498 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 ACACBO00763 2458 aa13.34□□□□□ -0.27
LIG1-212ENST00000596549 FLRT2O43155 660 aa13.33□□□□□ -0.28
LIG1-212ENST00000596549 FTH1P19P0C7X4 201 aa13.33□□□□□ -0.28
LIG1-212ENST00000596549 RHOQP17081 205 aa13.33□□□□□ -0.28
LIG1-212ENST00000596549 MAT2AP31153 395 aaKnown RBP13.33□□□□□ -0.28
LIG1-212ENST00000596549 CHRNA3P32297 505 aa13.33□□□□□ -0.28
LIG1-212ENST00000596549 MAPKAPK2P49137 400 aa13.33□□□□□ -0.28
LIG1-212ENST00000596549 CCT8P50990 548 aa13.33□□□□□ -0.28
LIG1-212ENST00000596549 ZNF143P52747 638 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms