RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PSMD8P48556 350 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 ARF5P84085 180 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 EFHC2Q5JST6 749 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 FAM46CQ5VWP2 391 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 KIAA0895LQ68EN5 471 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 RETSATQ6NUM9 610 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 LRSAM1Q6UWE0 723 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 Q6ZVU0 165 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 TMC6Q7Z403 805 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 HDDC3Q8N4P3 179 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 ZCCHC9Q8N567 271 aaKnown RBP13.35□□□□□ -0.27
USE1-207ENST00000596136 ARFGAP1Q8N6T3 406 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 ATP11CQ8NB49 1132 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 TMIEQ8NEW7 156 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 OR2A12Q8NGT7 310 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 OR2T34Q8NGX1 318 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 OMDQ99983 421 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 CEP44Q9C0F1 390 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 MAGEH1Q9H213 219 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 KDM4CQ9H3R0 1056 aa13.35□□□□□ -0.27
USE1-207ENST00000596136 TPX2Q9ULW0 747 aaKnown RBP13.35□□□□□ -0.27
USE1-207ENST00000596136 LRRC72A6NJI9 287 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 ATMINO43313 823 aaPredicted RBP13.34□□□□□ -0.27
USE1-207ENST00000596136 RNASEH2AO75792 299 aaKnown RBP13.34□□□□□ -0.27
USE1-207ENST00000596136 KCNK5O95279 499 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 GYPCP04921 128 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 SERPING1P05155 500 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 ADRB1P08588 477 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 HNRNPH3P31942 346 aaKnown RBP13.34□□□□□ -0.27
USE1-207ENST00000596136 HTR7P34969 479 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 SERPINH1P50454 418 aaKnown RBP13.34□□□□□ -0.27
USE1-207ENST00000596136 CCR5P51681 352 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 METAP1P53582 386 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 ADPRHP54922 357 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 BNC1Q01954 994 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 ZNF252P-AS1Q0IIN9 211 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 RWDD4Q6NW29 188 aaKnown RBP13.34□□□□□ -0.27
USE1-207ENST00000596136 SCYL2Q6P3W7 929 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 NCEH1Q6PIU2 408 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 PIP4P1Q86T03 277 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 DNAAF5Q86Y56 855 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 PLPP6Q8IY26 295 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 DRC7Q8IY82 874 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 PYROXD2Q8N2H3 581 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 MINDY1Q8N5J2 469 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 PIP4K2CQ8TBX8 421 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 GANCQ8TET4 914 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 ARHGEF2Q92974 986 aaKnown RBP13.34□□□□□ -0.27
USE1-207ENST00000596136 ISG20Q96AZ6 181 aaKnown RBP13.34□□□□□ -0.27
USE1-207ENST00000596136 TRIM11Q96F44 468 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 SPON2Q9BUD6 331 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 XPO4Q9C0E2 1151 aaKnown RBP13.34□□□□□ -0.27
USE1-207ENST00000596136 NOL6Q9H6R4 1146 aaKnown RBP13.34□□□□□ -0.27
USE1-207ENST00000596136 ATP13A1Q9HD20 1204 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 FSCN3Q9NQT6 498 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 CNOT8Q9UFF9 292 aaKnown RBP13.34□□□□□ -0.27
USE1-207ENST00000596136 LUC7L2Q9Y383 392 aaKnown RBP13.34□□□□□ -0.27
USE1-207ENST00000596136 SLCO1B1Q9Y6L6 691 aa13.34□□□□□ -0.27
USE1-207ENST00000596136 A0A1W2PPC4 97 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 EIF3CLB5ME19 914 aaKnown RBP13.33□□□□□ -0.28
USE1-207ENST00000596136 C1QTNF3-AMACRE9PGA6 284 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 CBX4O00257 560 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 CTSLP07711 333 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 DESP17661 470 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 PSMA2P25787 234 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 CHRNA3P32297 505 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 ACVRL1P37023 503 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 MAPK8P45983 427 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 GRIA4P48058 902 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 AFF3P51826 1226 aaKnown RBP13.33□□□□□ -0.28
USE1-207ENST00000596136 GRIK2Q13002 908 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 SLC14A1Q13336 389 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 ACAP1Q15027 740 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 C22orf39Q6P5X5 142 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 LINGO4Q6UY18 593 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 PSTKQ8IV42 348 aaKnown RBP13.33□□□□□ -0.28
USE1-207ENST00000596136 PCDH20Q8N6Y1 951 aaKnown RBP13.33□□□□□ -0.28
USE1-207ENST00000596136 RTL3Q8N8U3 475 aaKnown RBP13.33□□□□□ -0.28
USE1-207ENST00000596136 CCDC114Q96M63 670 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 EIF3CQ99613 913 aaKnown RBP13.33□□□□□ -0.28
USE1-207ENST00000596136 TRIM7Q9C029 511 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 MIR1-1HGQ9H1L0 117 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 EBF2Q9HAK2 575 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 MRPL47Q9HD33 250 aaKnown RBP13.33□□□□□ -0.28
USE1-207ENST00000596136 TM9SF3Q9HD45 589 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 DNAI1Q9UI46 699 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 FARP1Q9Y4F1 1045 aaPredicted RBP13.33□□□□□ -0.28
USE1-207ENST00000596136 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.33□□□□□ -0.28
USE1-207ENST00000596136 SCINQ9Y6U3 715 aa13.33□□□□□ -0.28
USE1-207ENST00000596136 LATO43561 262 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 PLRG1O43660 514 aaKnown RBP13.32□□□□□ -0.28
USE1-207ENST00000596136 KDELR3O43731 214 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 OPHN1O60890 802 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 RAMP2O60895 175 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 FSBPO95073 299 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 PRNPP04156 253 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 TPM3P06753 285 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 ZNF883P0CG24 379 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 CEACAM1P13688 526 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 CD59P13987 128 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms