RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 PROSCO94903 275 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 LCA5LO95447 670 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 CD48P09326 243 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 ERCC2P18074 760 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 MAOBP27338 520 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 SLC8A1P32418 973 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 MPLP40238 635 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 PSMD8P48556 350 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 SERPINH1P50454 418 aaKnown RBP11.39□□□□□ -0.59
VRK3-210ENST00000596121 ARSEP51690 589 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 DPYSQ14117 519 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 POLD3Q15054 466 aaPredicted RBP11.39□□□□□ -0.59
VRK3-210ENST00000596121 CST6Q15828 149 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 CSRP2Q16527 193 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 DPYSL2Q16555 572 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 PPP6R3Q5H9R7 873 aaPredicted RBP11.39□□□□□ -0.59
VRK3-210ENST00000596121 AFMIDQ63HM1 303 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 IL31Q6EBC2 164 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 SLC36A4Q6YBV0 504 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 RFX8Q6ZV50 586 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 LPCAT2Q7L5N7 544 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 POLNQ7Z5Q5 900 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 C11orf74Q86VG3 221 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 PSTKQ8IV42 348 aaKnown RBP11.39□□□□□ -0.59
VRK3-210ENST00000596121 ARHGAP12Q8IWW6 846 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 NPWQ8N729 165 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 CTNNBL1Q8WYA6 563 aaPredicted RBP11.39□□□□□ -0.59
VRK3-210ENST00000596121 TSC1Q92574 1164 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 HSPH1Q92598 858 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 NUP205Q92621 2012 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 PIGKQ92643 395 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 ZNF419Q96HQ0 510 aaPredicted RBP11.39□□□□□ -0.59
VRK3-210ENST00000596121 CELF6Q96J87 481 aaKnown RBP11.39□□□□□ -0.59
VRK3-210ENST00000596121 GPR174Q9BXC1 333 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 SLC39A8Q9C0K1 460 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 NEUROG2Q9H2A3 272 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 C6orf106Q9H6K1 298 aaPredicted RBP11.39□□□□□ -0.59
VRK3-210ENST00000596121 LRRC19Q9H756 370 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 FBRSQ9HAH7 460 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 PCDH18Q9HCL0 1135 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 ETNK2Q9NVF9 386 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 UVRAGQ9P2Y5 699 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.39□□□□□ -0.59
VRK3-210ENST00000596121 LAMA1P25391 3075 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 ATXN2Q99700 1313 aaKnown RBP11.38□□□□□ -0.59
VRK3-210ENST00000596121 TNRC6BQ9UPQ9 1833 aaKnown RBP11.38□□□□□ -0.59
VRK3-210ENST00000596121 A0A1W2PP55 124 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 RCCD1A6NED2 376 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 SOWAHDA6NJG2 315 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 TMEM110-MUSTN1A8MSY1 372 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 J3KR12 359 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 MCF2LO15068 1137 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 BNIP3LO60238 219 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 GDF9O60383 454 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 MTA2O94776 668 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 ZNF806P0C7X5 589 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 ACADMP11310 421 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 AMPD1P23109 780 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 OXTRP30559 389 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 DRD3P35462 400 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 NNMTP40261 264 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 HCAR3P49019 387 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 ZBTB16Q05516 673 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 ZNF33AQ06730 810 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 MMRN1Q13201 1228 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 SERINC3Q13530 473 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 ELAVL3Q14576 367 aaKnown RBP11.38□□□□□ -0.59
VRK3-210ENST00000596121 TCEAL1Q15170 157 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 POM121L1PQ3SYA9 428 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 BOLA3Q53S33 107 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 SPDYCQ5MJ68 293 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 LYSMD4Q5XG99 296 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 RETSATQ6NUM9 610 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 C22orf39Q6P5X5 142 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 RAD9BQ6WBX8 426 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 DPY19L3Q6ZPD9 716 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 ARHGAP36Q6ZRI8 547 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 TMEM139Q8IV31 216 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 FAM71BQ8TC56 605 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 FAM131CQ96AQ9 280 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 HSPA12BQ96MM6 686 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 PANX2Q96RD6 677 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 CATSPERBQ9H7T0 1116 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.38□□□□□ -0.59
VRK3-210ENST00000596121 FBXL12Q9NXK8 326 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 PILRBQ9UKJ0 227 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 REXO2Q9Y3B8 237 aaKnown RBP11.38□□□□□ -0.59
VRK3-210ENST00000596121 PCDHGA5Q9Y5G8 931 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 WASF2Q9Y6W5 498 aa11.38□□□□□ -0.59
VRK3-210ENST00000596121 DCHS1Q96JQ0 3298 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 RALGAPA1Q6GYQ0 2036 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 METTL12A8MUP2 240 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 EIF3CLB5ME19 914 aaKnown RBP11.37□□□□□ -0.59
VRK3-210ENST00000596121 FGF10O15520 208 aaPredicted RBP11.37□□□□□ -0.59
VRK3-210ENST00000596121 LRP3O75074 770 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 NDUFS2O75306 463 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 IL1BP01584 269 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 DNTTP04053 509 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 DESP17661 470 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 CDC25BP30305 580 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms