RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 RFWD2Q8NHY2 731 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 PXYLP1Q8TE99 480 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 SIK2Q9H0K1 926 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 PRDM16Q9HAZ2 1276 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 PCDHB8Q9UN66 801 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 SH3GLB1Q9Y371 365 aa17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 MRPL42Q9Y6G3 142 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-205ENST00000594973 SF3B1O75533 1304 aaKnown RBP eCLIP17.4■□□□□ 0.386e-8■■■■■ 58.8
SHKBP1-205ENST00000594973 BUD23O43709 281 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 LRIG2O94898 1065 aa17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 MT-ND3P03897 115 aa17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 FDFT1P37268 417 aa17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 CBX3Q13185 183 aa17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 TRMT10BQ6PF06 316 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 LVRNQ6Q4G3 990 aa17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 PID1Q7Z2X4 250 aa17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 LRRC6Q86X45 466 aa17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 PDSS2Q86YH6 399 aa17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 COLGALT2Q8IYK4 626 aa17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 FAM193BQ96PV7 902 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 EBNA1BP2Q99848 306 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 XAB2Q9HCS7 855 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 DCTN4Q9UJW0 460 aa17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 PAIP2BQ9ULR5 123 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 MKI67P46013 3256 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-205ENST00000594973 IQANK1A0A1B0GTG1 560 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 ARHGEF37A1IGU5 675 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 INPPL1O15357 1258 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 APOEP02649 317 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 IDO1P14902 403 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 GRIA2P42262 883 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 SESN2P58004 480 aaPredicted RBP17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 ZBTB16Q05516 673 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 DSC1Q08554 894 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 RWDD4Q6NW29 188 aaKnown RBP17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 PDZD4Q76G19 769 aaPredicted RBP17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 SMYD1Q8NB12 490 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 OR6Y1Q8NGX8 325 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 DIS3LQ8TF46 1054 aaKnown RBP17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 SERAC1Q96JX3 654 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 FAM161BQ96MY7 647 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 VPS11Q9H270 941 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 EBF3Q9H4W6 596 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 KLHL8Q9P2G9 620 aaPredicted RBP17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 SFMBT1Q9UHJ3 866 aa17.39■□□□□ 0.38
SHKBP1-205ENST00000594973 WDR27A2RRH5 827 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 MSI1O43347 362 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 UGT1A9O60656 530 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 C1QAP02745 245 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 UQCRBP14927 111 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 CLCN2P51788 898 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 ADARP55265 1226 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 PHEXP78562 749 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 OLIG2Q13516 323 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 SEPT7Q16181 437 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 BTBD8Q5XKL5 378 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 SLC26A11Q86WA9 606 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 SCUBE1Q8IWY4 988 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 TCP10LQ8TDR4 215 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 NMD3Q96D46 503 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 LRRC39Q96DD0 335 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 CELF6Q96J87 481 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 AGAP3Q96P47 875 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 PGLYRP2Q96PD5 576 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 TSEN34Q9BSV6 310 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 UGT1A7Q9HAW7 530 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 UGT1A10Q9HAW8 530 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 UGT1A8Q9HAW9 530 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 PNPLA8Q9NP80 782 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 SMYD2Q9NRG4 433 aa17.39■□□□□ 0.37
SHKBP1-205ENST00000594973 WDR91A4D1P6 747 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 TADA2AO75478 443 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 CPA3P15088 417 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 PAX3P23760 479 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 SMAD1Q15797 465 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 LRRC8DQ7L1W4 858 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 B3GALT6Q96L58 329 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 LBHD1Q9BQE6 289 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 TBCCD1Q9NVR7 557 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 A0A0G2JND7 137 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 ARVCFO00192 962 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 TNFRSF10BO14763 440 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 TM7SF2O76062 418 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 HNRNPCP07910 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 ADRA1DP25100 572 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 HCAR3P49019 387 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 GPR15P49685 360 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 FAM189BP81408 668 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 MPP3Q13368 585 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 DDR2Q16832 855 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 RIPOR1Q6ZS17 1223 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 SATL1Q86VE3 508 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 RASSF3Q86WH2 238 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 REM2Q8IYK8 340 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 UNC5BQ8IZJ1 945 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 BANPQ8N9N5 519 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 SLC43A3Q8NBI5 491 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 GSDMBQ8TAX9 411 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 CLIC5Q9NZA1 410 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms