RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.76■□□□□ 0.43
IRF3-208ENST00000594387 PLXNA2O75051 1894 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 TMEM131Q92545 1883 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 PCDH15Q96QU1 1955 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 ASCC3Q8N3C0 2202 aaKnown RBP17.75■□□□□ 0.43
IRF3-208ENST00000594387 TBC1D3DA0A087WVF3 549 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 TBC1D3IA0A087WXS9 549 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 TBC1D3EA0A087X179 549 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 TBC1D3KA0A087X1G2 549 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 TCRBV5S1A1TA0A578 114 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 TBC1D3FA6NER0 549 aaPredicted RBP17.75■□□□□ 0.43
IRF3-208ENST00000594387 TBC1D3LB9A6J9 549 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 LRIG2O94898 1065 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 TBC1D3HP0C7X1 549 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 VAV1P15498 845 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 CD27P26842 260 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 EPHB2P29323 1055 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 DNA2P51530 1060 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 AFF3P51826 1226 aaKnown RBP17.75■□□□□ 0.43
IRF3-208ENST00000594387 GALCP54803 685 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 SCAPQ12770 1279 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 POLD3Q15054 466 aaPredicted RBP17.75■□□□□ 0.43
IRF3-208ENST00000594387 PPP1R15BQ5SWA1 713 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 TBC1D3GQ6DHY5 549 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 TBC1D3CQ6IPX1 549 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 PLEKHA7Q6IQ23 1121 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 LINGO4Q6UY18 593 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 TBC1D3Q8IZP1 549 aaPredicted RBP17.75■□□□□ 0.43
IRF3-208ENST00000594387 MINDY1Q8N5J2 469 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 PIP4K2CQ8TBX8 421 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 BIRC7Q96CA5 298 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 PSMB7Q99436 277 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 SYT11Q9BT88 431 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 TMEM248Q9NWD8 314 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 MYO1AQ9UBC5 1043 aa17.75■□□□□ 0.43
IRF3-208ENST00000594387 CACNA1EQ15878 2313 aa17.74■□□□□ 0.43
IRF3-208ENST00000594387 TM4SF5O14894 197 aa17.74■□□□□ 0.43
IRF3-208ENST00000594387 SLC7A4O43246 635 aa17.74■□□□□ 0.43
IRF3-208ENST00000594387 RAMP2O60895 175 aa17.74■□□□□ 0.43
IRF3-208ENST00000594387 CER1O95813 267 aa17.74■□□□□ 0.43
IRF3-208ENST00000594387 PRNPP04156 253 aa17.74■□□□□ 0.43
IRF3-208ENST00000594387 CHRNA3P32297 505 aa17.74■□□□□ 0.43
IRF3-208ENST00000594387 NOVA1P51513 510 aaKnown RBP17.74■□□□□ 0.43
IRF3-208ENST00000594387 SLC45A4Q5BKX6 768 aa17.74■□□□□ 0.43
IRF3-208ENST00000594387 NCEH1Q6PIU2 408 aa17.74■□□□□ 0.43
IRF3-208ENST00000594387 PPP1R16AQ96I34 528 aa17.74■□□□□ 0.43
IRF3-208ENST00000594387 CEP44Q9C0F1 390 aa17.74■□□□□ 0.43
IRF3-208ENST00000594387 KDM4CQ9H3R0 1056 aa17.74■□□□□ 0.43
IRF3-208ENST00000594387 FSCN3Q9NQT6 498 aa17.74■□□□□ 0.43
IRF3-208ENST00000594387 FZD10Q9ULW2 581 aa17.74■□□□□ 0.43
IRF3-208ENST00000594387 CXorf51AA0A1B0GTR3 108 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 MED19A0JLT2 244 aaPredicted RBP17.73■□□□□ 0.43
IRF3-208ENST00000594387 EIF3CLB5ME19 914 aaKnown RBP17.73■□□□□ 0.43
IRF3-208ENST00000594387 KPNA3O00505 521 aaPredicted RBP17.73■□□□□ 0.43
IRF3-208ENST00000594387 DDX3XO00571 662 aaKnown RBP eCLIP17.73■□□□□ 0.439e-11■□□□□ 9.6
IRF3-208ENST00000594387 FGF10O15520 208 aaPredicted RBP17.73■□□□□ 0.43
IRF3-208ENST00000594387 DAPK3O43293 454 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 ATMINO43313 823 aaPredicted RBP17.73■□□□□ 0.43
IRF3-208ENST00000594387 PRPSAP2O60256 369 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 KCNK5O95279 499 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 MT-CO1P00395 513 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 HTR7P34969 479 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 PBX1P40424 430 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 SERPINH1P50454 418 aaKnown RBP17.73■□□□□ 0.43
IRF3-208ENST00000594387 TPI1P60174 286 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 MANEALQ5VSG8 457 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 C22orf39Q6P5X5 142 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 PRPF39Q86UA1 669 aaKnown RBP17.73■□□□□ 0.43
IRF3-208ENST00000594387 AADATQ8N5Z0 425 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 PCDH20Q8N6Y1 951 aaKnown RBP17.73■□□□□ 0.43
IRF3-208ENST00000594387 TMIEQ8NEW7 156 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 EIF3CQ99613 913 aaKnown RBP17.73■□□□□ 0.43
IRF3-208ENST00000594387 XPO4Q9C0E2 1151 aaKnown RBP17.73■□□□□ 0.43
IRF3-208ENST00000594387 OSGEPQ9NPF4 335 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 ZNHIT6Q9NWK9 470 aaKnown RBP17.73■□□□□ 0.43
IRF3-208ENST00000594387 PPM1HQ9ULR3 514 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 DOCK9Q9BZ29 2069 aa17.73■□□□□ 0.43
IRF3-208ENST00000594387 TMEM191CA6NGB0 347 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 ZSCAN5CA6NGD5 496 aaPredicted RBP17.72■□□□□ 0.43
IRF3-208ENST00000594387 FAM72CH0Y354 149 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 CEACAM1P13688 526 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 CSRP1P21291 193 aaKnown RBP17.72■□□□□ 0.43
IRF3-208ENST00000594387 GLDCP23378 1020 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 CCR5P51681 352 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 C21orf59P57076 290 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 YBEYP58557 167 aaPredicted RBP17.72■□□□□ 0.43
IRF3-208ENST00000594387 GRIK2Q13002 908 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 SLC14A1Q13336 389 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 TRIM14Q14142 442 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 ERMARDQ5T6L9 678 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 FAM72AQ5TYM5 149 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 E4F1Q66K89 784 aaPredicted RBP17.72■□□□□ 0.43
IRF3-208ENST00000594387 FAM72DQ6L9T8 149 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 PSAPL1Q6NUJ1 521 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 FAM72BQ86X60 149 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 PYROXD2Q8N2H3 581 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 RYBPQ8N488 228 aaPredicted RBP17.72■□□□□ 0.43
IRF3-208ENST00000594387 FNIP1Q8TF40 1166 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 ARHGEF2Q92974 986 aaKnown RBP17.72■□□□□ 0.43
IRF3-208ENST00000594387 ACE2Q9BYF1 805 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms