RNA–Protein interactions for RNA: ENST00000593174.5

CCDC130-212, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,783 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-212ENST00000593174 RFWD3Q6PCD5 774 aa17.32■□□□□ 0.36
CCDC130-212ENST00000593174 TP53INP2Q8IXH6 220 aa17.32■□□□□ 0.36
CCDC130-212ENST00000593174 RTL3Q8N8U3 475 aaKnown RBP17.32■□□□□ 0.36
CCDC130-212ENST00000593174 TTC16Q8NEE8 873 aa17.32■□□□□ 0.36
CCDC130-212ENST00000593174 TFB1MQ8WVM0 346 aaKnown RBP17.32■□□□□ 0.36
CCDC130-212ENST00000593174 PWWP2AQ96N64 755 aa17.32■□□□□ 0.36
CCDC130-212ENST00000593174 PITPNM3Q9BZ71 974 aa17.32■□□□□ 0.36
CCDC130-212ENST00000593174 ZNF576Q9H609 170 aa17.32■□□□□ 0.36
CCDC130-212ENST00000593174 NSUN3Q9H649 340 aaKnown RBP17.32■□□□□ 0.36
CCDC130-212ENST00000593174 TASP1Q9H6P5 420 aa17.32■□□□□ 0.36
CCDC130-212ENST00000593174 SFXN1Q9H9B4 322 aa17.32■□□□□ 0.36
CCDC130-212ENST00000593174 USP29Q9HBJ7 922 aa17.32■□□□□ 0.36
CCDC130-212ENST00000593174 STARD13Q9Y3M8 1113 aa17.32■□□□□ 0.36
CCDC130-212ENST00000593174 WASH4PA8MWX3 477 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 ZNF197O14709 1029 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 PPP1R12AO14974 1030 aaPredicted RBP17.31■□□□□ 0.36
CCDC130-212ENST00000593174 KCNN4O15554 427 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 ATP5HO75947 161 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 CNTN5O94779 1100 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 GBP2P32456 591 aaPredicted RBP17.31■□□□□ 0.36
CCDC130-212ENST00000593174 ZXDBP98169 803 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 BNIP1Q12981 228 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 HIF1AQ16665 826 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 LZTR1Q8N653 840 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 CCNYQ8ND76 341 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 GDAP1Q8TB36 358 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 PRCCQ92733 491 aaPredicted RBP17.31■□□□□ 0.36
CCDC130-212ENST00000593174 MYEOVQ96EZ4 313 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 CELF6Q96J87 481 aaKnown RBP17.31■□□□□ 0.36
CCDC130-212ENST00000593174 LGMNQ99538 433 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 DDX50Q9BQ39 737 aaKnown RBP17.31■□□□□ 0.36
CCDC130-212ENST00000593174 KLC2Q9H0B6 622 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 TRABDQ9H4I3 376 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 PRDM12Q9H4Q4 367 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 YY1AP1Q9H869 796 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 VPS37BQ9H9H4 285 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 DZANK1Q9NVP4 752 aa17.31■□□□□ 0.36
CCDC130-212ENST00000593174 PSMC3IPQ9P2W1 217 aaPredicted RBP17.31■□□□□ 0.36
CCDC130-212ENST00000593174 VGLL3A8MV65 326 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 NCAM2O15394 837 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 KRT15P19012 456 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 MX2P20592 715 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 AP1B1Q10567 949 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 MPP2Q14168 576 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 KLHL38Q2WGJ6 581 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 ALFQ53S48 1182 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 TCEAL5Q5H9L2 206 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 ADGRF1Q5T601 910 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 TFAP2DQ7Z6R9 452 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 ATP11CQ8NB49 1132 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 SMG9Q9H0W8 520 aaKnown RBP17.3■□□□□ 0.36
CCDC130-212ENST00000593174 ABCF3Q9NUQ8 709 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 NDFIP2Q9NV92 336 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 TMEM248Q9NWD8 314 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 CFAP97Q9P2B7 532 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 LSM7Q9UK45 103 aaKnown RBP17.3■□□□□ 0.36
CCDC130-212ENST00000593174 MRPS23Q9Y3D9 190 aaKnown RBP17.3■□□□□ 0.36
CCDC130-212ENST00000593174 HELZP42694 1942 aaKnown RBP17.3■□□□□ 0.36
CCDC130-212ENST00000593174 SHROOM3Q8TF72 1996 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 TRDMT1O14717 391 aaKnown RBP17.3■□□□□ 0.36
CCDC130-212ENST00000593174 SCAMP3O14828 347 aaKnown RBP17.3■□□□□ 0.36
CCDC130-212ENST00000593174 UBOX5O94941 541 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 ASMTLO95671 621 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 LATS1O95835 1130 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 EZRP15311 586 aaKnown RBP17.3■□□□□ 0.36
CCDC130-212ENST00000593174 TAC1P20366 129 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 AVPR1AP37288 418 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 GEMIN4P57678 1058 aaKnown RBP17.3■□□□□ 0.36
CCDC130-212ENST00000593174 GALNT2Q10471 571 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 HYAL1Q12794 435 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 PDIA2Q13087 525 aaKnown RBP17.3■□□□□ 0.36
CCDC130-212ENST00000593174 C5orf22Q49AR2 442 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 RABGAP1LQ5R372 815 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 RARS2Q5T160 578 aaKnown RBP17.3■□□□□ 0.36
CCDC130-212ENST00000593174 HEATR6Q6AI08 1181 aaKnown RBP17.3■□□□□ 0.36
CCDC130-212ENST00000593174 CIR1Q86X95 450 aaPredicted RBP17.3■□□□□ 0.36
CCDC130-212ENST00000593174 ZBED8Q8IZ13 594 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 CMTM8Q8IZV2 173 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 CFAP52Q8N1V2 620 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 ALKBH8Q96BT7 664 aaKnown RBP17.3■□□□□ 0.36
CCDC130-212ENST00000593174 DONSONQ9NYP3 566 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 SH3BP1Q9Y3L3 701 aa17.3■□□□□ 0.36
CCDC130-212ENST00000593174 FARP1Q9Y4F1 1045 aaPredicted RBP17.3■□□□□ 0.36
CCDC130-212ENST00000593174 C2orf16Q68DN1 1984 aa17.29■□□□□ 0.36
CCDC130-212ENST00000593174 SOBPA7XYQ1 873 aa17.29■□□□□ 0.36
CCDC130-212ENST00000593174 LEFTY2O00292 366 aa17.29■□□□□ 0.36
CCDC130-212ENST00000593174 GREM1O60565 184 aa17.29■□□□□ 0.36
CCDC130-212ENST00000593174 TSPAN3O60637 253 aa17.29■□□□□ 0.36
CCDC130-212ENST00000593174 ZWINTO95229 277 aa17.29■□□□□ 0.36
CCDC130-212ENST00000593174 ALDH3A1P30838 453 aa17.29■□□□□ 0.36
CCDC130-212ENST00000593174 RPL22P35268 128 aaKnown RBP17.29■□□□□ 0.36
CCDC130-212ENST00000593174 NRLP54845 237 aa17.29■□□□□ 0.36
CCDC130-212ENST00000593174 SETDB1Q15047 1291 aa17.29■□□□□ 0.36
CCDC130-212ENST00000593174 PRKD1Q15139 912 aaPredicted RBP17.29■□□□□ 0.36
CCDC130-212ENST00000593174 PREPLQ4J6C6 727 aaPredicted RBP17.29■□□□□ 0.36
CCDC130-212ENST00000593174 WLSQ5T9L3 541 aa17.29■□□□□ 0.36
CCDC130-212ENST00000593174 Q6ZNB5 142 aa17.29■□□□□ 0.36
CCDC130-212ENST00000593174 ARHGAP12Q8IWW6 846 aa17.29■□□□□ 0.36
CCDC130-212ENST00000593174 DENND1AQ8TEH3 1009 aa17.29■□□□□ 0.36
CCDC130-212ENST00000593174 FBF1Q8TES7 1133 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms