RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 RPS24P62847 133 aaKnown RBP13.76□□□□□ -0.21
VMP1-217ENST00000593168 FAM153CQ494X1 144 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 ANKRD20A2Q5SQ80 823 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 RNASEH2BQ5TBB1 312 aaKnown RBP13.76□□□□□ -0.21
VMP1-217ENST00000593168 ANKRD20A1Q5TYW2 823 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 ANKRD20A3Q5VUR7 823 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 CEP128Q6ZU80 1094 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 SETD3Q86TU7 594 aaPredicted RBP13.76□□□□□ -0.21
VMP1-217ENST00000593168 PPIL6Q8IXY8 311 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 CFAP52Q8N1V2 620 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 KIAA1958Q8N8K9 716 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 HJURPQ8NCD3 748 aaPredicted RBP13.76□□□□□ -0.21
VMP1-217ENST00000593168 ZSCAN18Q8TBC5 510 aaPredicted RBP13.76□□□□□ -0.21
VMP1-217ENST00000593168 SH3RF2Q8TEC5 729 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 CPT1BQ92523 772 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 USP13Q92995 863 aaPredicted RBP13.76□□□□□ -0.21
VMP1-217ENST00000593168 TMA16Q96EY4 203 aaKnown RBP13.76□□□□□ -0.21
VMP1-217ENST00000593168 MAGEH1Q9H213 219 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 IGSF9Q9P2J2 1179 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 FAM153AQ9UHL3 310 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 IPO11Q9UI26 975 aaKnown RBP13.76□□□□□ -0.21
VMP1-217ENST00000593168 TRHDEQ9UKU6 1024 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 SHOC2Q9UQ13 582 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 TBC1D30Q9Y2I9 924 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 R4GN57 208 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.75□□□□□ -0.21
VMP1-217ENST00000593168 ILVBLA1L0T0 632 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 TYW5A2RUC4 315 aaKnown RBP13.75□□□□□ -0.21
VMP1-217ENST00000593168 STK25O00506 426 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 MATN3O15232 486 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 CHADO15335 359 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 CEBPBP17676 345 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 PTPN3P26045 913 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 FDFT1P37268 417 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 HSPA9P38646 679 aaKnown RBP13.75□□□□□ -0.21
VMP1-217ENST00000593168 IFI35P80217 286 aaPredicted RBP13.75□□□□□ -0.21
VMP1-217ENST00000593168 ZNF177Q13360 481 aaPredicted RBP13.75□□□□□ -0.21
VMP1-217ENST00000593168 SLMAPQ14BN4 828 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 POLD3Q15054 466 aaPredicted RBP13.75□□□□□ -0.21
VMP1-217ENST00000593168 PARP6Q2NL67 630 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 MPPE1Q53F39 396 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 TEX44Q53QW1 395 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 MPP7Q5T2T1 576 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 C6orf118Q5T5N4 469 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 ARHGEF18Q6ZSZ5 1173 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 HDXQ7Z353 690 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 CIR1Q86X95 450 aaPredicted RBP13.75□□□□□ -0.21
VMP1-217ENST00000593168 ARID3BQ8IVW6 561 aaPredicted RBP13.75□□□□□ -0.21
VMP1-217ENST00000593168 BBS7Q8IWZ6 715 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 KIAA2013Q8IYS2 634 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 ZNF567Q8N184 647 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 NAT8LQ8N9F0 302 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 DEPDC1BQ8WUY9 529 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 PRCCQ92733 491 aaPredicted RBP13.75□□□□□ -0.21
VMP1-217ENST00000593168 TEKT5Q96M29 485 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 ZSWIM3Q96MP5 696 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 FUT8Q9BYC5 575 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 KIF9Q9HAQ2 790 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 ETNK1Q9HBU6 452 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 RAB6BQ9NRW1 208 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 ZNF446Q9NWS9 450 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 WNT16Q9UBV4 365 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 CA14Q9ULX7 337 aa13.75□□□□□ -0.21
VMP1-217ENST00000593168 KCNK1O00180 336 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 TRDMT1O14717 391 aaKnown RBP13.74□□□□□ -0.21
VMP1-217ENST00000593168 MAP2K7O14733 419 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 TSPAN3O60637 253 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 PPFIA2O75334 1257 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 METTL18O95568 372 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 JCHAINP01591 159 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 LMNAP02545 664 aaKnown RBP13.74□□□□□ -0.21
VMP1-217ENST00000593168 GBP2P32456 591 aaPredicted RBP13.74□□□□□ -0.21
VMP1-217ENST00000593168 BASP1P80723 227 aaKnown RBP13.74□□□□□ -0.21
VMP1-217ENST00000593168 DHX9Q08211 1270 aaKnown RBP13.74□□□□□ -0.21
VMP1-217ENST00000593168 IL10RBQ08334 325 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 CBLBQ13191 982 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 SEMA5AQ13591 1074 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 HNRNPDQ14103 355 aaKnown RBP13.74□□□□□ -0.21
VMP1-217ENST00000593168 KCNJ11Q14654 390 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 CASP8Q14790 479 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 ZNF77Q15935 545 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 ANO4Q32M45 955 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 SPDYCQ5MJ68 293 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 POTEHQ6S545 545 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 ZNF783Q6ZMS7 281 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 ARHGAP36Q6ZRI8 547 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 PID1Q7Z2X4 250 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 ZCCHC9Q8N567 271 aaKnown RBP13.74□□□□□ -0.21
VMP1-217ENST00000593168 ITFG1Q8TB96 612 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 MAML1Q92585 1016 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 EXOC4Q96A65 974 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 HMCESQ96FZ2 354 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 MYADMQ96S97 322 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 IL12RB2Q99665 862 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 TXLNGYQ9BZA5 131 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 PHACTR1Q9C0D0 580 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 SMG9Q9H0W8 520 aaKnown RBP13.74□□□□□ -0.21
VMP1-217ENST00000593168 SEPT10Q9P0V9 454 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 TBC1D14Q9P2M4 693 aa13.74□□□□□ -0.21
VMP1-217ENST00000593168 CCL26Q9Y258 94 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms