RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 NT5DC3Q86UY8 548 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 LONP2Q86WA8 852 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 RCOR2Q8IZ40 523 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 UBL4BQ8N7F7 174 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 NETO2Q8NC67 525 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 MDGA1Q8NFP4 955 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 OR2T3Q8NH03 318 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 KRT35Q92764 455 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 FAF2Q96CS3 445 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 CCDC114Q96M63 670 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 TPSD1Q9BZJ3 242 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 KLC2Q9H0B6 622 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 FBRSQ9HAH7 460 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 SP110Q9HB58 689 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 ZSCAN32Q9NX65 697 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 PCDHA3Q9Y5H8 950 aa21.2■□□□□ 0.98
DNMT1-227ENST00000592342 ZNF318Q5VUA4 2279 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 MIF4GDA9UHW6 222 aaKnown RBP21.19■□□□□ 0.98
DNMT1-227ENST00000592342 K7ERQ8 282 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 APOL1O14791 398 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 RNASEH1O60930 286 aaKnown RBP21.19■□□□□ 0.98
DNMT1-227ENST00000592342 SIN3BO75182 1162 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 TDGF1P13385 188 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 GABRG2P18507 467 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 CETN2P41208 172 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 RECQLP46063 649 aaPredicted RBP21.19■□□□□ 0.98
DNMT1-227ENST00000592342 MARCKSL1P49006 195 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 DNA2P51530 1060 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 RWDD2BP57060 319 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 DMWDQ09019 674 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 TCF15Q12870 199 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 AFMIDQ63HM1 303 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 NCBP2-AS2Q69YL0 99 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 MFSD7Q6UXD7 560 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 KIAA1324Q6UXG2 1013 aaKnown RBP21.19■□□□□ 0.98
DNMT1-227ENST00000592342 METTL3Q86U44 580 aaKnown RBP21.19■□□□□ 0.98
DNMT1-227ENST00000592342 RASSF3Q86WH2 238 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 ARHGAP12Q8IWW6 846 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 EXD1Q8NHP7 514 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 ATOH1Q92858 354 aaPredicted RBP21.19■□□□□ 0.98
DNMT1-227ENST00000592342 UBA2Q9UBT2 640 aaPredicted RBP21.19■□□□□ 0.98
DNMT1-227ENST00000592342 EBF1Q9UH73 591 aa21.19■□□□□ 0.98
DNMT1-227ENST00000592342 FCF1Q9Y324 198 aaKnown RBP21.19■□□□□ 0.98
DNMT1-227ENST00000592342 FARP1Q9Y4F1 1045 aaPredicted RBP21.19■□□□□ 0.98
DNMT1-227ENST00000592342 MYO18AQ92614 2054 aaKnown RBP21.19■□□□□ 0.98
DNMT1-227ENST00000592342 CCDC163A0A0D9SF12 145 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 C3orf70A6NLC5 250 aaPredicted RBP21.18■□□□□ 0.98
DNMT1-227ENST00000592342 ZFXP17010 805 aaPredicted RBP21.18■□□□□ 0.98
DNMT1-227ENST00000592342 NDUFV2P19404 249 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 PAFAH1B3Q15102 231 aaKnown RBP21.18■□□□□ 0.98
DNMT1-227ENST00000592342 KAZNQ674X7 775 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 C22orf39Q6P5X5 142 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 ZC3H14Q6PJT7 736 aaKnown RBP21.18■□□□□ 0.98
DNMT1-227ENST00000592342 SPOCD1Q6ZMY3 1216 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 Q6ZVU0 165 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 WDR5BQ86VZ2 330 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 CACUL1Q86Y37 369 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 TMPRSS6Q8IU80 811 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 ATPAF2Q8N5M1 289 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 PQLC3Q8N755 202 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 CASKIN2Q8WXE0 1202 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 PRCCQ92733 491 aaPredicted RBP21.18■□□□□ 0.98
DNMT1-227ENST00000592342 PTPRN2Q92932 1015 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 CEP44Q9C0F1 390 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 PRDM16Q9HAZ2 1276 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 IPO11Q9UI26 975 aaKnown RBP21.18■□□□□ 0.98
DNMT1-227ENST00000592342 PACSIN2Q9UNF0 486 aaPredicted RBP21.18■□□□□ 0.98
DNMT1-227ENST00000592342 ACTL7AQ9Y615 435 aa21.18■□□□□ 0.98
DNMT1-227ENST00000592342 MUC22E2RYF6 1773 aaPredicted RBP21.18■□□□□ 0.98
DNMT1-227ENST00000592342 J3KR12 359 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 SMAD6O43541 496 aaKnown RBP21.17■□□□□ 0.98
DNMT1-227ENST00000592342 MFSD11O43934 449 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 PRAMEF11O60813 436 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 ACADMP11310 421 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 VAV1P15498 845 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 CDKN2BP42772 138 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 DYNLT1P63172 113 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 TFDP2Q14188 446 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 TFDP3Q5H9I0 405 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 C9orf64Q5T6V5 341 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 STK40Q8N2I9 435 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 FRS2Q8WU20 508 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 NSMCE1Q8WV22 266 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 OR8D1Q8WZ84 308 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 SIPA1Q96FS4 1042 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 MRGPRX1Q96LB2 322 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 MKRN2Q9H000 416 aaKnown RBP21.17■□□□□ 0.98
DNMT1-227ENST00000592342 SLC6A17Q9H1V8 727 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 TNKS2Q9H2K2 1166 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 CD248Q9HCU0 757 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 PCDHGA2Q9Y5H1 932 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 CACNA1IQ9P0X4 2223 aa21.17■□□□□ 0.98
DNMT1-227ENST00000592342 COPAP53621 1224 aa21.16■□□□□ 0.98
DNMT1-227ENST00000592342 IL10RBQ08334 325 aa21.16■□□□□ 0.98
DNMT1-227ENST00000592342 ELAVL3Q14576 367 aaKnown RBP21.16■□□□□ 0.98
DNMT1-227ENST00000592342 LLGL1Q15334 1064 aa21.16■□□□□ 0.98
DNMT1-227ENST00000592342 USP39Q53GS9 565 aaKnown RBP21.16■□□□□ 0.98
DNMT1-227ENST00000592342 INO80DQ53TQ3 878 aaPredicted RBP21.16■□□□□ 0.98
DNMT1-227ENST00000592342 ZNF776Q68DI1 518 aaPredicted RBP21.16■□□□□ 0.98
DNMT1-227ENST00000592342 ARHGAP36Q6ZRI8 547 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms