RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 SERPINB6P35237 376 aa16.99■□□□□ 0.31
GCDH-213ENST00000590627 NR2C2P49116 596 aa16.99■□□□□ 0.31
GCDH-213ENST00000590627 CKAP4Q07065 602 aaKnown RBP16.99■□□□□ 0.31
GCDH-213ENST00000590627 SF3A2Q15428 464 aaKnown RBP16.99■□□□□ 0.31
GCDH-213ENST00000590627 RPLP0P6Q8NHW5 317 aa16.99■□□□□ 0.31
GCDH-213ENST00000590627 DDI1Q8WTU0 396 aa16.99■□□□□ 0.31
GCDH-213ENST00000590627 P2RY11Q96G91 374 aa16.99■□□□□ 0.31
GCDH-213ENST00000590627 FRMD8P1Q9BZ68 369 aaPredicted RBP16.99■□□□□ 0.31
GCDH-213ENST00000590627 HOMER3Q9NSC5 361 aa16.99■□□□□ 0.31
GCDH-213ENST00000590627 EBF1Q9UH73 591 aa16.99■□□□□ 0.31
GCDH-213ENST00000590627 TBC1D30Q9Y2I9 924 aa16.99■□□□□ 0.31
GCDH-213ENST00000590627 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.98■□□□□ 0.31
GCDH-213ENST00000590627 TM4SF5O14894 197 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 HOXC11O43248 304 aaPredicted RBP16.98■□□□□ 0.31
GCDH-213ENST00000590627 LUC7L3O95232 432 aaKnown RBP16.98■□□□□ 0.31
GCDH-213ENST00000590627 NFATC1O95644 943 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 APBB3O95704 486 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 ADH1CP00326 375 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 CYP17A1P05093 508 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 DYNLT1P63172 113 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 ZNF177Q13360 481 aaPredicted RBP16.98■□□□□ 0.31
GCDH-213ENST00000590627 DHCR24Q15392 516 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 PLK5Q496M5 336 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 LY6G5CQ5SRR4 150 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 NAIF1Q69YI7 327 aaPredicted RBP16.98■□□□□ 0.31
GCDH-213ENST00000590627 TPGS1Q6ZTW0 290 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 BZW1Q7L1Q6 419 aaKnown RBP16.98■□□□□ 0.31
GCDH-213ENST00000590627 SETD3Q86TU7 594 aaPredicted RBP16.98■□□□□ 0.31
GCDH-213ENST00000590627 CIR1Q86X95 450 aaPredicted RBP16.98■□□□□ 0.31
GCDH-213ENST00000590627 NPWQ8N729 165 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 EZH1Q92800 747 aaPredicted RBP16.98■□□□□ 0.31
GCDH-213ENST00000590627 HHIPQ96QV1 700 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 RRAGDQ9NQL2 400 aaPredicted RBP16.98■□□□□ 0.31
GCDH-213ENST00000590627 VPS45Q9NRW7 570 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 SMARCAL1Q9NZC9 954 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 DTLQ9NZJ0 730 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 MFHAS1Q9Y4C4 1052 aa16.98■□□□□ 0.31
GCDH-213ENST00000590627 DOCK4Q8N1I0 1966 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 PECAM1P16284 738 aaPredicted RBP16.97■□□□□ 0.31
GCDH-213ENST00000590627 OR1E1P30953 314 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 MPLP40238 635 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 NDST2P52849 883 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 YBEYP58557 167 aaPredicted RBP16.97■□□□□ 0.31
GCDH-213ENST00000590627 GBE1Q04446 702 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 SLC10A2Q12908 348 aaPredicted RBP16.97■□□□□ 0.31
GCDH-213ENST00000590627 DMC1Q14565 340 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 NOMO1Q15155 1222 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 CCNG2Q16589 344 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 CYP1B1Q16678 543 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 C6orf118Q5T5N4 469 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 DRICH1Q6PGQ1 229 aaPredicted RBP16.97■□□□□ 0.31
GCDH-213ENST00000590627 ZNF783Q6ZMS7 281 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 TFAP2DQ7Z6R9 452 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 LRRC49Q8IUZ0 686 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 ARHGAP12Q8IWW6 846 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 PRELID2Q8N945 189 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 ZNF557Q8N988 423 aaPredicted RBP16.97■□□□□ 0.31
GCDH-213ENST00000590627 FIBINQ8TAL6 211 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 P3H4Q92791 437 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 OLFM3Q96PB7 478 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 BBS2Q9BXC9 721 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 SLC2A11Q9BYW1 496 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 NOL6Q9H6R4 1146 aaKnown RBP16.97■□□□□ 0.31
GCDH-213ENST00000590627 LRRC19Q9H756 370 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 NDFIP2Q9NV92 336 aa16.97■□□□□ 0.31
GCDH-213ENST00000590627 R3HDM2Q9Y2K5 976 aaKnown RBP16.97■□□□□ 0.31
GCDH-213ENST00000590627 MAP1BP46821 2468 aaKnown RBP16.96■□□□□ 0.31
GCDH-213ENST00000590627 GOLGA6L10A0A0M3HER8 536 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 ILVBLA1L0T0 632 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 KRIT1O00522 736 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 MFSD11O43934 449 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 RHOBTB1O94844 696 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 OXCT1P55809 520 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 OTUD4Q01804 1114 aaKnown RBP16.96■□□□□ 0.31
GCDH-213ENST00000590627 GAD2Q05329 585 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 GALNT2Q10471 571 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 XRCC4Q13426 336 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 ELF2Q15723 593 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 CCDC6Q16204 474 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 CXorf57Q6NSI4 855 aaKnown RBP16.96■□□□□ 0.31
GCDH-213ENST00000590627 ADAT2Q7Z6V5 191 aaKnown RBP16.96■□□□□ 0.31
GCDH-213ENST00000590627 SLC35B2Q8TB61 432 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 ACTL9Q8TC94 416 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 AP1M1Q9BXS5 423 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 BRD8Q9H0E9 1235 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 DUSP15Q9H1R2 295 aaPredicted RBP16.96■□□□□ 0.31
GCDH-213ENST00000590627 POLR3BQ9NW08 1133 aaPredicted RBP16.96■□□□□ 0.31
GCDH-213ENST00000590627 SAE1Q9UBE0 346 aaPredicted RBP16.96■□□□□ 0.31
GCDH-213ENST00000590627 FBXO10Q9UK96 956 aa16.96■□□□□ 0.31
GCDH-213ENST00000590627 NEDD8-MDP1E9PL57 170 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 CCDC188H7C350 402 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 CACNG3O60359 315 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 RAMP2O60895 175 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 ADH5P11766 374 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 TYRP14679 529 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 MX2P20592 715 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 PDK1Q15118 436 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 PARP15Q460N3 678 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 STPG1Q5TH74 334 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 NPNTQ6UXI9 565 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms