RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 MYO1GB0I1T2 1018 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 MGEA5O60502 916 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 TSPAN1O60635 241 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 UQCRBP14927 111 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 ETS2P15036 469 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 PSEN2P49810 448 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 MOB2Q70IA6 237 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 FZD8Q9H461 694 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 ALG9Q9H6U8 611 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 PTPRHQ9HD43 1115 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 NDUFAF1Q9Y375 327 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 PLIN3O60664 434 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 C2P06681 752 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 FASP25445 335 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 LRPAP1P30533 357 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 SLC10A6Q3KNW5 377 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 RALGPS1Q5JS13 557 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 SAMD4BQ5PRF9 694 aaKnown RBP17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 RDH11Q8TC12 318 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 SLC4A5Q9BY07 1137 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 SYTL2Q9HCH5 934 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 CLIC5Q9NZA1 410 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 CPA4Q9UI42 421 aa17.38■□□□□ 0.37
SMARCA4-215ENST00000590574 TAF1P21675 1872 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 ZNF135P52742 658 aaPredicted RBP17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 PSME3P61289 254 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 KCNJ11Q14654 390 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 OLA1Q9NTK5 396 aaKnown RBP17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 C6orf203Q9P0P8 240 aaPredicted RBP17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 SLC17A6Q9P2U8 582 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 ABT1Q9ULW3 272 aaKnown RBP17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 VPS9D1Q9Y2B5 631 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 NRCAMQ92823 1304 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 SLC12A8A0AV02 714 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 F5H5T6 163 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 CCDC166P0CW27 439 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 HNRNPLP14866 589 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 IVDP26440 423 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 PPIL2Q13356 520 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 TMEM86AQ8N2M4 240 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 MYRFQ9Y2G1 1151 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 DERAQ9Y315 318 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 PTPN9P43378 593 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 SLC26A9Q7LBE3 791 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 ARHGEF4Q9NR80 690 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 STYXL1Q9Y6J8 313 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 TYROBPO43914 113 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 LTA4HP09960 611 aaKnown RBP17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 ATP5F1P24539 256 aaPredicted RBP17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 RGS4P49798 205 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 CLEC4CQ8WTT0 213 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 UCMAQ8WVF2 138 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 CEP19Q96LK0 163 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 LPIN3Q9BQK8 851 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 RUBCNLQ9H714 662 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 TOGARAM1Q9Y4F4 1720 aa17.37■□□□□ 0.37
SMARCA4-215ENST00000590574 EPHX2P34913 555 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 IDH3AP50213 366 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 EP400NLQ6ZTU2 488 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 SEPHS2Q99611 448 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 TMEM216Q9P0N5 145 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 EME2A4GXA9 379 aaPredicted RBP17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 ZNF839A8K0R7 811 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 INPP4BO15327 924 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 SERPINH1P50454 418 aaKnown RBP17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 TBX4P57082 545 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 MSLNQ13421 630 aaPredicted RBP17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 MIER2Q8N344 545 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 CACYBPQ9HB71 228 aaKnown RBP17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 PRKAG3Q9UGI9 489 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 PRPF19Q9UMS4 504 aaKnown RBP17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 CRTAMO95727 393 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 FRG1Q14331 258 aaKnown RBP17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 IQSEC1Q6DN90 963 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 ARHGAP22Q7Z5H3 698 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 ZNF567Q8N184 647 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 MAB21L3Q8N8X9 362 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 PPTC7Q8NI37 304 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 UTP6Q9NYH9 597 aaKnown RBP17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 RCOR3Q9P2K3 495 aaPredicted RBP17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 LYNP07948 512 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 GRIA1P42261 906 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 BEX3Q00994 111 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 IGDCC3Q8IVU1 814 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 NPAS2Q99743 824 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 CHRAC1Q9NRG0 131 aa17.36■□□□□ 0.37
SMARCA4-215ENST00000590574 PRMT9Q6P2P2 845 aa17.35■□□□□ 0.37
SMARCA4-215ENST00000590574 RBBP8Q99708 897 aa17.35■□□□□ 0.37
SMARCA4-215ENST00000590574 ZNF395Q9H8N7 513 aaPredicted RBP17.35■□□□□ 0.37
SMARCA4-215ENST00000590574 SCUBE2Q9NQ36 999 aa17.35■□□□□ 0.37
SMARCA4-215ENST00000590574 KANSL1LA0AUZ9 987 aa17.35■□□□□ 0.37
SMARCA4-215ENST00000590574 TRIM38O00635 465 aa17.35■□□□□ 0.37
SMARCA4-215ENST00000590574 TSPAN8P19075 237 aa17.35■□□□□ 0.37
SMARCA4-215ENST00000590574 SQLEQ14534 574 aa17.35■□□□□ 0.37
SMARCA4-215ENST00000590574 FBXO39Q8N4B4 442 aa17.35■□□□□ 0.37
SMARCA4-215ENST00000590574 MRPL57Q9BQC6 102 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-215ENST00000590574 TEX264Q9Y6I9 313 aa17.35■□□□□ 0.37
SMARCA4-215ENST00000590574 TBX10O75333 385 aa17.35■□□□□ 0.37
SMARCA4-215ENST00000590574 RGS2P41220 211 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms