RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	ATP13A1	Q9HD20	1204 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	MRPL47	Q9HD33	250 aa	Known RBP	17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	PPM1H	Q9ULR3	514 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867		A0A1W2PP55	124 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	CBX4	O00257	560 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	PLK4	O00444	970 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	MCF2L	O15068	1137 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	DNTT	P04053	509 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	PCK1	P35558	622 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	NNMT	P40261	264 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	PSMD8	P48556	350 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	SERPINH1	P50454	418 aa	Known RBP	17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	USP30	Q70CQ3	517 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	TC2N	Q8N9U0	490 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	ATP11C	Q8NB49	1132 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	CHST14	Q8NCH0	376 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	TRIM5	Q9C035	493 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	MAGEH1	Q9H213	219 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	DHX35	Q9H5Z1	703 aa	Known RBP	17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	CAPN10	Q9HC96	672 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	FSCN3	Q9NQT6	498 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	FBXL12	Q9NXK8	326 aa		17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	EVL	Q9UI08	416 aa	Predicted RBP	17.69	■□□□□ 0.42
MBD1-221	ENST00000589867	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	PRR5-ARHGAP8	B1AHC4	643 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	CDX4	O14627	284 aa	Predicted RBP	17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	NDUFS2	O75306	463 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	CLCN6	P51797	869 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	ZNF75D	P51815	510 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	ARHGAP8	P85298	464 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	SLC25A11	Q02978	314 aa	Known RBP	17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	ACCSL	Q4AC99	568 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	DCAF12L1	Q5VU92	463 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	C22orf39	Q6P5X5	142 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	SLC23A3	Q6PIS1	610 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	UMODL1-AS1	Q8N2C9	162 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	HMCES	Q96FZ2	354 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	EPAS1	Q99814	870 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	TNKS2	Q9H2K2	1166 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	LRRC19	Q9H756	370 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	SPTLC3	Q9NUV7	552 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	ANAPC7	Q9UJX3	599 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	SCML1	Q9UN30	329 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	FCF1	Q9Y324	198 aa	Known RBP	17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	MFHAS1	Q9Y4C4	1052 aa		17.68	■□□□□ 0.42
MBD1-221	ENST00000589867	CABIN1	Q9Y6J0	2220 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	TM4SF5	O14894	197 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	RAMP2	O60895	175 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	RNF8	O76064	485 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	SEMA4F	O95754	770 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	IGHV4-34	P06331	123 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	GOT1	P17174	413 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	C5AR1	P21730	350 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	ID4	P47928	161 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	SLC20A2	Q08357	652 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	ACAP1	Q15027	740 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	POLD3	Q15054	466 aa	Predicted RBP	17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	TRIM61	Q5EBN2	209 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	KCNT1	Q5JUK3	1230 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	AFMID	Q63HM1	303 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	LEKR1	Q6ZMV7	388 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	PSTK	Q8IV42	348 aa	Known RBP	17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	ARHGAP12	Q8IWW6	846 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	NETO2	Q8NC67	525 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	FOXJ1	Q92949	421 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	BTBD1	Q9H0C5	482 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	EBF2	Q9HAK2	575 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	SGK2	Q9HBY8	427 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	CWC15	Q9P013	229 aa	Known RBP	17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	NCOR2	Q9Y618	2525 aa		17.67	■□□□□ 0.42
MBD1-221	ENST00000589867	CXorf51A	A0A1B0GTR3	108 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	RASA4B	C9J798	803 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	AKR1B15	C9JRZ8	316 aa	Predicted RBP	17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	ALOX15B	O15296	676 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	RASA4	O43374	803 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	KDELR3	O43731	214 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	PRPSAP2	O60256	369 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	RNASEH1	O60930	286 aa	Known RBP	17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	ADH1B	P00325	375 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	IL1B	P01584	269 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	RARA	P10276	462 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	HTR7	P34969	479 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	HOXD12	P35452	270 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	LIMK1	P53667	647 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	TPI1	P60174	286 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	BNC1	Q01954	994 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	DPYS	Q14117	519 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	PIGH	Q14442	188 aa	Predicted RBP	17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	DPYSL2	Q16555	572 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	SMTNL2	Q2TAL5	461 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	POM121L1P	Q3SYA9	428 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	TTC31	Q49AM3	519 aa	Predicted RBP	17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	AASDH	Q4L235	1098 aa	Predicted RBP	17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	IL31	Q6EBC2	164 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	DPY19L3	Q6ZPD9	716 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	RFX8	Q6ZV50	586 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	TP53INP2	Q8IXH6	220 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	HDDC3	Q8N4P3	179 aa		17.66	■□□□□ 0.42
MBD1-221	ENST00000589867	NPW	Q8N729	165 aa		17.66	■□□□□ 0.42

Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms