RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 ZNF564Q8TBZ8 553 aaPredicted RBP16.41■□□□□ 0.22
RETREG3-206ENST00000588423 PIGKQ92643 395 aa16.41■□□□□ 0.22
RETREG3-206ENST00000588423 HSPA12BQ96MM6 686 aa16.41■□□□□ 0.22
RETREG3-206ENST00000588423 ANP32EQ9BTT0 268 aa16.41■□□□□ 0.22
RETREG3-206ENST00000588423 GPR174Q9BXC1 333 aa16.41■□□□□ 0.22
RETREG3-206ENST00000588423 GPATCH2LQ9NWQ4 482 aa16.41■□□□□ 0.22
RETREG3-206ENST00000588423 HPCAL4Q9UM19 191 aa16.41■□□□□ 0.22
RETREG3-206ENST00000588423 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.41■□□□□ 0.22
RETREG3-206ENST00000588423 FRYLO94915 3013 aa16.41■□□□□ 0.22
RETREG3-206ENST00000588423 GPR179Q6PRD1 2367 aa16.41■□□□□ 0.22
RETREG3-206ENST00000588423 TNRC6BQ9UPQ9 1833 aaKnown RBP16.4■□□□□ 0.22
RETREG3-206ENST00000588423 ZSCAN5CA6NGD5 496 aaPredicted RBP16.4■□□□□ 0.22
RETREG3-206ENST00000588423 METTL12A8MUP2 240 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 K7ERQ8 282 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 EEF2KO00418 725 aaKnown RBP16.4■□□□□ 0.22
RETREG3-206ENST00000588423 SMAD6O43541 496 aaKnown RBP16.4■□□□□ 0.22
RETREG3-206ENST00000588423 KDELR3O43731 214 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 ITPKAP23677 461 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 SF3A2Q15428 464 aaKnown RBP16.4■□□□□ 0.22
RETREG3-206ENST00000588423 CCDC6Q16204 474 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 DPYSL2Q16555 572 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 C22orf39Q6P5X5 142 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 LINGO4Q6UY18 593 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 RFX8Q6ZV50 586 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 PLPP6Q8IY26 295 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 DEFB119Q8N690 84 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 PCDH20Q8N6Y1 951 aaKnown RBP16.4■□□□□ 0.22
RETREG3-206ENST00000588423 OR2A12Q8NGT7 310 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 TEKT4Q8WW24 435 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 DNASE2BQ8WZ79 361 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 FAM131CQ96AQ9 280 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 ISG20Q96AZ6 181 aaKnown RBP16.4■□□□□ 0.22
RETREG3-206ENST00000588423 KCTD15Q96SI1 283 aaPredicted RBP16.4■□□□□ 0.22
RETREG3-206ENST00000588423 NOL6Q9H6R4 1146 aaKnown RBP16.4■□□□□ 0.22
RETREG3-206ENST00000588423 TMEM74BQ9NUR3 256 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 FBXL12Q9NXK8 326 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 CTTNBP2NLQ9P2B4 639 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 PPM1HQ9ULR3 514 aa16.4■□□□□ 0.22
RETREG3-206ENST00000588423 SPAG17Q6Q759 2223 aa16.39■□□□□ 0.22
RETREG3-206ENST00000588423 THADAQ6YHU6 1953 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 A0A1W2PP55 124 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 C1QTNF3-AMACRE9PGA6 284 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 KHNYNO15037 678 aaKnown RBP16.39■□□□□ 0.21
RETREG3-206ENST00000588423 SEMA4FO95754 770 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 CD160O95971 181 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 IL1BP01584 269 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 GOT1P17174 413 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 IL1R2P27930 398 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 ACSL1P33121 698 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 PSMD8P48556 350 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 NDST2P52849 883 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 LIMK1P53667 647 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 SLC25A11Q02978 314 aaKnown RBP16.39■□□□□ 0.21
RETREG3-206ENST00000588423 DUOXA1Q1HG43 343 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 AASDHQ4L235 1098 aaPredicted RBP16.39■□□□□ 0.21
RETREG3-206ENST00000588423 SLC23A3Q6PIS1 610 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 FAM124AQ86V42 546 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 AADATQ8N5Z0 425 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 TMIEQ8NEW7 156 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 NETO1Q8TDF5 533 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 CASKIN2Q8WXE0 1202 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 BTBD6Q96KE9 485 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 OMDQ99983 421 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 PACSIN1Q9BY11 444 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 NEUROG2Q9H2A3 272 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 SMOC1Q9H4F8 434 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 LRRC19Q9H756 370 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 ZWILCHQ9H900 591 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 SUSD2Q9UGT4 822 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 INTUQ9ULD6 942 aa16.39■□□□□ 0.21
RETREG3-206ENST00000588423 NYNRINQ9P2P1 1898 aaKnown RBP16.39■□□□□ 0.21
RETREG3-206ENST00000588423 FAM186AA6NE01 2351 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 MEI4A8MW99 385 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 RASA4BC9J798 803 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 SLC7A4O43246 635 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 DAPK3O43293 454 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 RASA4O43374 803 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 ZNF821O75541 412 aaPredicted RBP16.38■□□□□ 0.21
RETREG3-206ENST00000588423 RNASEH2AO75792 299 aaKnown RBP16.38■□□□□ 0.21
RETREG3-206ENST00000588423 DRD3P35462 400 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 RECQLP46063 649 aaPredicted RBP16.38■□□□□ 0.21
RETREG3-206ENST00000588423 SERINC3Q13530 473 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 HADHQ16836 314 aaKnown RBP16.38■□□□□ 0.21
RETREG3-206ENST00000588423 DCAF12L1Q5VU92 463 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 DAB2IPQ5VWQ8 1189 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 RHOT2Q8IXI1 618 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 HDDC3Q8N4P3 179 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 PIP4K2CQ8TBX8 421 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 GANCQ8TET4 914 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 NUSAP1Q9BXS6 441 aaKnown RBP16.38■□□□□ 0.21
RETREG3-206ENST00000588423 KDM4CQ9H3R0 1056 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 SPTLC3Q9NUV7 552 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 DLL3Q9NYJ7 618 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 CWC15Q9P013 229 aaKnown RBP16.38■□□□□ 0.21
RETREG3-206ENST00000588423 SERGEFQ9UGK8 458 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 TPX2Q9ULW0 747 aaKnown RBP16.38■□□□□ 0.21
RETREG3-206ENST00000588423 ZNF292O60281 2723 aa16.38■□□□□ 0.21
RETREG3-206ENST00000588423 ABCA7Q8IZY2 2146 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 CHD5Q8TDI0 1954 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 LRRC72A6NJI9 287 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms