RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 PPM1EQ8WY54 764 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 LRRC39Q96DD0 335 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 ZNF419Q96HQ0 510 aaPredicted RBP20.87■□□□□ 0.93
ATG4D-204ENST00000586417 SIGLEC10Q96LC7 697 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 AGAP3Q96P47 875 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 GCNAQ96QF7 691 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 PLAC1Q9HBJ0 212 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 RABGEF1Q9UJ41 708 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 MRPS23Q9Y3D9 190 aaKnown RBP20.87■□□□□ 0.93
ATG4D-204ENST00000586417 EXOC1LA0A1B0GW35 172 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 ACSL4O60488 711 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 CDH16O75309 829 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 MLNP12872 115 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 FOSL2P15408 326 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 HDCP19113 662 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 PHBP35232 272 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 ATP1A2P50993 1020 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 GPR158Q5T848 1215 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 TDRPQ86YL5 185 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 LRRC49Q8IUZ0 686 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 PALM2Q8IXS6 379 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 LEMD2Q8NC56 503 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 PLD4Q96BZ4 506 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 ZSWIM3Q96MP5 696 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 RPRD1AQ96P16 312 aaPredicted RBP20.87■□□□□ 0.93
ATG4D-204ENST00000586417 IL12RB2Q99665 862 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 GKN1Q9NS71 199 aa20.87■□□□□ 0.93
ATG4D-204ENST00000586417 MATN3O15232 486 aa20.86■□□□□ 0.93
ATG4D-204ENST00000586417 STC2O76061 302 aa20.86■□□□□ 0.93
ATG4D-204ENST00000586417 FGF19O95750 216 aa20.86■□□□□ 0.93
ATG4D-204ENST00000586417 NFKB1P19838 968 aa20.86■□□□□ 0.93
ATG4D-204ENST00000586417 SLC6A4P31645 630 aa20.86■□□□□ 0.93
ATG4D-204ENST00000586417 LMAN1P49257 510 aa20.86■□□□□ 0.93
ATG4D-204ENST00000586417 ZXDBP98169 803 aa20.86■□□□□ 0.93
ATG4D-204ENST00000586417 KCTD11Q693B1 232 aa20.86■□□□□ 0.93
ATG4D-204ENST00000586417 LRRC8BQ6P9F7 803 aa20.86■□□□□ 0.93
ATG4D-204ENST00000586417 CIR1Q86X95 450 aaPredicted RBP20.86■□□□□ 0.93
ATG4D-204ENST00000586417 CYP4X1Q8N118 509 aa20.86■□□□□ 0.93
ATG4D-204ENST00000586417 KLF16Q9BXK1 252 aaPredicted RBP20.86■□□□□ 0.93
ATG4D-204ENST00000586417 SMG9Q9H0W8 520 aaKnown RBP20.86■□□□□ 0.93
ATG4D-204ENST00000586417 STMN4Q9H169 189 aaPredicted RBP20.86■□□□□ 0.93
ATG4D-204ENST00000586417 ACSS3Q9H6R3 686 aa20.86■□□□□ 0.93
ATG4D-204ENST00000586417 SMPD4Q9NXE4 827 aa20.86■□□□□ 0.93
ATG4D-204ENST00000586417 RSPH14Q9UHP6 348 aa20.86■□□□□ 0.93
ATG4D-204ENST00000586417 H3BQ06 376 aaPredicted RBP20.85■□□□□ 0.93
ATG4D-204ENST00000586417 CACNG3O60359 315 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 OLFM2O95897 454 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 KLKB1P03952 638 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 CCNB1P14635 433 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 PPP2R2AP63151 447 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 SARNPP82979 210 aaKnown RBP20.85■□□□□ 0.93
ATG4D-204ENST00000586417 ITPRIPL1Q6GPH6 555 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 KLHDC8BQ8IXV7 354 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 MPP5Q8N3R9 675 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 RIBC1Q8N443 379 aaPredicted RBP20.85■□□□□ 0.93
ATG4D-204ENST00000586417 FBF1Q8TES7 1133 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 AZIN2Q96A70 460 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 ZFRQ96KR1 1074 aaKnown RBP20.85■□□□□ 0.93
ATG4D-204ENST00000586417 MLPHQ9BV36 600 aaPredicted RBP20.85■□□□□ 0.93
ATG4D-204ENST00000586417 DONSONQ9NYP3 566 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 FETUBQ9UGM5 382 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 ZNF197O14709 1029 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 SHOX2O60902 331 aaPredicted RBP20.85■□□□□ 0.93
ATG4D-204ENST00000586417 SUN1O94901 812 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 AP2A1O95782 977 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 PEX11BO96011 259 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 MBL2P11226 248 aaPredicted RBP20.85■□□□□ 0.93
ATG4D-204ENST00000586417 HARS2P49590 506 aaKnown RBP20.85■□□□□ 0.93
ATG4D-204ENST00000586417 ARFGAP2Q8N6H7 521 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 MAML1Q92585 1016 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 WBP2Q969T9 261 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 HMCESQ96FZ2 354 aa20.85■□□□□ 0.93
ATG4D-204ENST00000586417 IPO11Q9UI26 975 aaKnown RBP20.85■□□□□ 0.93
ATG4D-204ENST00000586417 TCRBV9S1A1TA0A576 114 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 ARHGAP42A6NI28 874 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 RASA4BC9J798 803 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 F5H5T6 163 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 RASA4O43374 803 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 SPAG6O75602 509 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 C1QAP02745 245 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 CKMP06732 381 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 FSHRP23945 695 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 MMP13P45452 471 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 SLC11A2P49281 568 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 EFTUD2Q15029 972 aaKnown RBP eCLIP20.84■□□□□ 0.933e-7■■□□□ 12.2
ATG4D-204ENST00000586417 RASA2Q15283 850 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 TIGD7Q6NT04 549 aaPredicted RBP20.84■□□□□ 0.93
ATG4D-204ENST00000586417 CES5AQ6NT32 575 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 RFWD3Q6PCD5 774 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 EXOC3L1Q86VI1 746 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 DENND1CQ8IV53 801 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 LGI2Q8N0V4 545 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 USP33Q8TEY7 942 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 FATE1Q969F0 183 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 XPO6Q96QU8 1125 aaKnown RBP20.84■□□□□ 0.93
ATG4D-204ENST00000586417 EBNA1BP2Q99848 306 aaKnown RBP20.84■□□□□ 0.93
ATG4D-204ENST00000586417 DHRS4Q9BTZ2 278 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 TASP1Q9H6P5 420 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 PPCSQ9HAB8 311 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms