RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 NOS2P35228 1153 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 CXCR3P49682 368 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 KRT83P78385 493 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 SLC6A3Q01959 620 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 APBA1Q02410 837 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 CCDC15Q0P6D6 951 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 PAK1Q13153 545 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 NME3Q13232 169 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 ALFQ53S48 1182 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 CDCP2Q5VXM1 449 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 FAM183BPQ6ZVS7 135 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 HORMAD1Q86X24 394 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 ERICH1Q86X53 443 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 ZNF397Q8NF99 534 aaPredicted RBP14.83□□□□□ -0.04
SDF2-202ENST00000585428 SHC3Q92529 594 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 NT5C3BQ969T7 300 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 C1orf74Q96LT6 269 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 NPY6RQ99463 290 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 CRACR2AQ9BSW2 395 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 SIK2Q9H0K1 926 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 ARHGEF38Q9NXL2 777 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 ZFR2Q9UPR6 939 aaKnown RBP14.83□□□□□ -0.04
SDF2-202ENST00000585428 FARP1Q9Y4F1 1045 aaPredicted RBP14.83□□□□□ -0.04
SDF2-202ENST00000585428 M0QYT0 321 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 BIN1O00499 593 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 SMAD6O43541 496 aaKnown RBP14.82□□□□□ -0.04
SDF2-202ENST00000585428 KALRNO60229 2985 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 BNIP3LO60238 219 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 SNAP91O60641 907 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 ZNF821O75541 412 aaPredicted RBP14.82□□□□□ -0.04
SDF2-202ENST00000585428 ADCY5O95622 1261 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 ERBB2P04626 1255 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 ACTN2P35609 894 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 USP8P40818 1118 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 TLE3Q04726 772 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 ARHGAP44Q17R89 818 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 TBC1D25Q3MII6 688 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 OTUD1Q5VV17 481 aaPredicted RBP14.82□□□□□ -0.04
SDF2-202ENST00000585428 OR6B2Q6IFH4 312 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 SLC26A9Q7LBE3 791 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 ABI3BPQ7Z7G0 1075 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 SETD3Q86TU7 594 aaPredicted RBP14.82□□□□□ -0.04
SDF2-202ENST00000585428 ATP11CQ8NB49 1132 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 KLK6Q92876 244 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 ARRDC3Q96B67 414 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 PGAP3Q96FM1 320 aaPredicted RBP14.82□□□□□ -0.04
SDF2-202ENST00000585428 IFT43Q96FT9 208 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 HDAC8Q9BY41 377 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 WDCPQ9H6R7 721 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 CAAP1Q9H8G2 361 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 PIGVQ9NUD9 493 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 APEX2Q9UBZ4 518 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 HS3ST3A1Q9Y663 406 aa14.82□□□□□ -0.04
SDF2-202ENST00000585428 A0A0D9SEW6 157 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 OPA1O60313 960 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 PIAS2O75928 621 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 FGFR1OPO95684 399 aaKnown RBP14.81□□□□□ -0.04
SDF2-202ENST00000585428 PRLRP16471 622 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 TFE3P19532 575 aaPredicted RBP14.81□□□□□ -0.04
SDF2-202ENST00000585428 HNRNPA2B1P22626 353 aaKnown RBP14.81□□□□□ -0.04
SDF2-202ENST00000585428 PON1P27169 355 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 CLCN1P35523 988 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 GGCXP38435 758 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 SNX16P57768 344 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 PTK2Q05397 1052 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 TMEM259Q4ZIN3 620 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 ARSIQ5FYB1 569 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 BRMS1LQ5PSV4 323 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 PCSK4Q6UW60 755 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 KDM7AQ6ZMT4 941 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 GPR155Q7Z3F1 870 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 IRF2BP1Q8IU81 584 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 PASD1Q8IV76 773 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 FAM181AQ8N9Y4 354 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 CHST14Q8NCH0 376 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 OR13H1Q8NG92 308 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 FAM174AQ8TBP5 190 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 BMFQ96LC9 184 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 FCRL3Q96P31 734 aaPredicted RBP14.81□□□□□ -0.04
SDF2-202ENST00000585428 NOX5Q96PH1 765 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 C2orf49Q9BVC5 232 aaPredicted RBP14.81□□□□□ -0.04
SDF2-202ENST00000585428 TKTL2Q9H0I9 626 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 MUC3BQ9H195 1237 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 RRN3Q9NYV6 651 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 VPS51Q9UID3 782 aa14.81□□□□□ -0.04
SDF2-202ENST00000585428 GCN1Q92616 2671 aaKnown RBP14.81□□□□□ -0.04
SDF2-202ENST00000585428 ARID1BQ8NFD5 2236 aaPredicted RBP14.81□□□□□ -0.04
SDF2-202ENST00000585428 IGLV3-10A0A075B6K4 115 aa14.8□□□□□ -0.04
SDF2-202ENST00000585428 LY6G6EA0A0G2JKS1 128 aa14.8□□□□□ -0.04
SDF2-202ENST00000585428 TEX51A0A1B0GUA7 166 aa14.8□□□□□ -0.04
SDF2-202ENST00000585428 GTPBP10A4D1E9 387 aaKnown RBP14.8□□□□□ -0.04
SDF2-202ENST00000585428 FOXN3O00409 490 aaPredicted RBP14.8□□□□□ -0.04
SDF2-202ENST00000585428 KPNA3O00505 521 aaPredicted RBP14.8□□□□□ -0.04
SDF2-202ENST00000585428 SCAMP1O15126 338 aa14.8□□□□□ -0.04
SDF2-202ENST00000585428 DAB1O75553 588 aa14.8□□□□□ -0.04
SDF2-202ENST00000585428 PRNPP04156 253 aa14.8□□□□□ -0.04
SDF2-202ENST00000585428 GP1BAP07359 652 aa14.8□□□□□ -0.04
SDF2-202ENST00000585428 RRM1P23921 792 aa14.8□□□□□ -0.04
SDF2-202ENST00000585428 AKT2P31751 481 aa14.8□□□□□ -0.04
SDF2-202ENST00000585428 CLCN6P51797 869 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms