RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 ZSCAN5DPP0CG00 497 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 CCNB1P14635 433 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 ETS1P14921 441 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 IL9P15248 144 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 GJA4P35212 333 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 RENBPP51606 427 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 SLC7A5Q01650 507 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 AAK1Q2M2I8 961 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 FUT11Q495W5 492 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 PITRM1Q5JRX3 1037 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 ANKRD20A2Q5SQ80 823 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 ANKRD20A1Q5TYW2 823 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 ANKRD20A3Q5VUR7 823 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 PRUNE1Q86TP1 453 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 KLHDC8BQ8IXV7 354 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 AHI1Q8N157 1196 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 ZNF567Q8N184 647 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 PHTF2Q8N3S3 785 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 GPR161Q8N6U8 529 aaKnown RBP16.46■□□□□ 0.23
SS18-226ENST00000585241 CNTD1Q8N815 330 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 TTC17Q96AE7 1141 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 CHFRQ96EP1 664 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 TEKT5Q96M29 485 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 SPON2Q9BUD6 331 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 BRD9Q9H8M2 597 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 GDF3Q9NR23 364 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 DNAJC17Q9NVM6 304 aaKnown RBP16.46■□□□□ 0.23
SS18-226ENST00000585241 GTSE1Q9NYZ3 720 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 HPCAL4Q9UM19 191 aa16.46■□□□□ 0.23
SS18-226ENST00000585241 SNAP91O60641 907 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 GLDCP23378 1020 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 ACTN2P35609 894 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 OPRD1P41143 372 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 DGKGP49619 791 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 VASPP50552 380 aaPredicted RBP16.45■□□□□ 0.22
SS18-226ENST00000585241 TERF1P54274 439 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 GEMIN4P57678 1058 aaKnown RBP16.45■□□□□ 0.22
SS18-226ENST00000585241 INO80DQ53TQ3 878 aaPredicted RBP16.45■□□□□ 0.22
SS18-226ENST00000585241 ADIPOR2Q86V24 386 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 SLC44A3Q8N4M1 653 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 CCDC110Q8TBZ0 833 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 NSMCE1Q8WV22 266 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 CASKIN2Q8WXE0 1202 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 DNASE1L2Q92874 299 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 UBA2Q9UBT2 640 aaPredicted RBP16.45■□□□□ 0.22
SS18-226ENST00000585241 LIMD1Q9UGP4 676 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.45■□□□□ 0.22
SS18-226ENST00000585241 ASIC3Q9UHC3 531 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 ATP8A1Q9Y2Q0 1164 aa16.45■□□□□ 0.22
SS18-226ENST00000585241 V9GYY5 206 aaPredicted RBP16.45■□□□□ 0.22
SS18-226ENST00000585241 C5orf42Q9H799 3197 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.44■□□□□ 0.22
SS18-226ENST00000585241 CBX4O00257 560 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 DNALI1O14645 258 aaPredicted RBP16.44■□□□□ 0.22
SS18-226ENST00000585241 TRIM24O15164 1050 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 JCHAINP01591 159 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 TNFRSF8P28908 595 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 CD68P34810 354 aaPredicted RBP16.44■□□□□ 0.22
SS18-226ENST00000585241 MAGEA6P43360 314 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 RPL21P46778 160 aaKnown RBP16.44■□□□□ 0.22
SS18-226ENST00000585241 GUCY2DQ02846 1103 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 TFF2Q03403 129 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 SULT2A1Q06520 285 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 SLC20A2Q08357 652 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 SLC10A7Q0GE19 358 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 LBRQ14739 615 aaKnown RBP16.44■□□□□ 0.22
SS18-226ENST00000585241 TRIP13Q15645 432 aaPredicted RBP16.44■□□□□ 0.22
SS18-226ENST00000585241 MARC1Q5VT66 337 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 ALG1LQ6GMV1 187 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 ITPRIPL1Q6GPH6 555 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 GRAMD4Q6IC98 578 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 RETSATQ6NUM9 610 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 WDR93Q6P2C0 686 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 ZNF354CQ86Y25 554 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 NAT16Q8N8M0 369 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 EIF1ADQ8N9N8 165 aaKnown RBP16.44■□□□□ 0.22
SS18-226ENST00000585241 LRRC45Q96CN5 670 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 SNF8Q96H20 258 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 PSKH2Q96QS6 385 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 GBA3Q9H227 469 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 PRDM6Q9NQX0 595 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 RBM22Q9NW64 420 aaKnown RBP eCLIP16.44■□□□□ 0.227e-7■■■□□ 14.8
SS18-226ENST00000585241 GRHL1Q9NZI5 618 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 SEPT10Q9P0V9 454 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 WHRNQ9P202 907 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 KLHL8Q9P2G9 620 aaPredicted RBP16.44■□□□□ 0.22
SS18-226ENST00000585241 DEC1Q9P2X7 70 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 PRKAG3Q9UGI9 489 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 SEPT3Q9UH03 358 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 HS3ST2Q9Y278 367 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 XIRP2A4UGR9 3374 aa16.44■□□□□ 0.22
SS18-226ENST00000585241 NDC80O14777 642 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 TP73O15350 636 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 ZBTB24O43167 697 aaPredicted RBP16.43■□□□□ 0.22
SS18-226ENST00000585241 SEC31AO94979 1220 aaKnown RBP16.43■□□□□ 0.22
SS18-226ENST00000585241 HLA-DQB2P05538 268 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 TUBBP07437 444 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 FDFT1P37268 417 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 HSPA9P38646 679 aaKnown RBP16.43■□□□□ 0.22
SS18-226ENST00000585241 MMP13P45452 471 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms