RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 ECT2LQ008S8 904 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 RHDQ02161 417 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 ADIGQ0VDE8 80 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 BST2Q10589 180 aaKnown RBP5.51□□□□□ -1.53
VAPA-207ENST00000583879 OVGP1Q12889 678 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 ZNF211Q13398 564 aaPredicted RBP5.51□□□□□ -1.53
VAPA-207ENST00000583879 STAT4Q14765 748 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 FAM133BQ5BKY9 247 aaKnown RBP5.51□□□□□ -1.53
VAPA-207ENST00000583879 FSCBQ5H9T9 825 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 PITRM1Q5JRX3 1037 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 RESP18Q5W5W9 173 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 NUGGCQ68CJ6 796 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 NADSYN1Q6IA69 706 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 MSANTD2Q6P1R3 559 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.51□□□□□ -1.53
VAPA-207ENST00000583879 IQCHQ86VS3 1027 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 MFN1Q8IWA4 741 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 FAM186BQ8IYM0 893 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 SIX6OS1Q8N1H7 587 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 SLC25A45Q8N413 288 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 AADATQ8N5Z0 425 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 UBA3Q8TBC4 463 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 SLC35F5Q8WV83 523 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 PTPRN2Q92932 1015 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 HIC2Q96JB3 615 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 ZNF578Q96N58 590 aaPredicted RBP5.51□□□□□ -1.53
VAPA-207ENST00000583879 LGMNQ99538 433 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 DDX50Q9BQ39 737 aaKnown RBP5.51□□□□□ -1.53
VAPA-207ENST00000583879 MMRN2Q9H8L6 949 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 ZDHHC3Q9NYG2 299 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 HESX1Q9UBX0 185 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 TSPAN16Q9UKR8 245 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 KIAA1257Q9ULG3 409 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 BPTFQ12830 3046 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 ASXL3Q9C0F0 2248 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 EDDM13A0A1B0GTR0 161 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 TYW5A2RUC4 315 aaKnown RBP5.5□□□□□ -1.53
VAPA-207ENST00000583879 ANKRD62A6NC57 917 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 PRAMEF26H0Y7S4 382 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 TRIM38O00635 465 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 SIGLEC6O43699 453 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 STX10O60499 249 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 RNGTTO60942 597 aaKnown RBP5.5□□□□□ -1.53
VAPA-207ENST00000583879 LUC7L3O95232 432 aaKnown RBP5.5□□□□□ -1.53
VAPA-207ENST00000583879 MOCS3O95396 460 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 IL1BP01584 269 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 MPOP05164 745 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 MYL1P05976 194 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 PTMAP06454 111 aaKnown RBP5.5□□□□□ -1.53
VAPA-207ENST00000583879 C6P13671 934 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 LCP1P13796 627 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 DRD3P35462 400 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 NUDT1P36639 197 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 NNMTP40261 264 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 LSSP48449 732 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 PSMD8P48556 350 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 TBX4P57082 545 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 TMPRSS3P57727 454 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 DAOAP59103 153 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 ERVPABLB-1P60509 514 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 PPP2CBP62714 309 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 RPS24P62847 133 aaKnown RBP5.5□□□□□ -1.53
VAPA-207ENST00000583879 PPP2CAP67775 309 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 ELAVL3Q14576 367 aaKnown RBP5.5□□□□□ -1.53
VAPA-207ENST00000583879 GOLGA7BQ2TAP0 167 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 SGO2Q562F6 1265 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 MS4A13Q5J8X5 152 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 ARHGAP40Q5TG30 622 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 BROXQ5VW32 411 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 CDCP2Q5VXM1 449 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 NAPEPLDQ6IQ20 393 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 LCLAT1Q6UWP7 414 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 KDM7AQ6ZMT4 941 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 MMS22LQ6ZRQ5 1243 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 SYT9Q86SS6 491 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 CCDC117Q8IWD4 279 aaPredicted RBP5.5□□□□□ -1.53
VAPA-207ENST00000583879 APCDD1Q8J025 514 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 CFAP52Q8N1V2 620 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 STK40Q8N2I9 435 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 CARNMT1Q8N4J0 409 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.5□□□□□ -1.53
VAPA-207ENST00000583879 HJURPQ8NCD3 748 aaPredicted RBP5.5□□□□□ -1.53
VAPA-207ENST00000583879 FBXL13Q8NEE6 735 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 OR4C6Q8NH72 309 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 TPCN2Q8NHX9 752 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 SNRNP27Q8WVK2 155 aaKnown RBP5.5□□□□□ -1.53
VAPA-207ENST00000583879 IRGQQ8WZA9 623 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 FAM131CQ96AQ9 280 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 MYEOVQ96EZ4 313 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 EEF2KMTQ96G04 330 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 KLHDC7BQ96G42 594 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 NAF1Q96HR8 494 aaKnown RBP5.5□□□□□ -1.53
VAPA-207ENST00000583879 RPL10LQ96L21 214 aaKnown RBP5.5□□□□□ -1.53
VAPA-207ENST00000583879 PRICKLE1Q96MT3 831 aaPredicted RBP5.5□□□□□ -1.53
VAPA-207ENST00000583879 DPH1Q9BZG8 443 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 CPNE5Q9HCH3 593 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 ZNF358Q9NW07 568 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 CYTH4Q9UIA0 394 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 RCOR1Q9UKL0 485 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 CFAP45Q9UL16 551 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms