RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, human

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-217	ENST00000583705	CTSO	P43234	321 aa	Predicted RBP	11.45	□□□□□ -0.58
MSI2-217	ENST00000583705	DEFB115	Q30KQ5	88 aa		11.45	□□□□□ -0.58
MSI2-217	ENST00000583705	KLHDC7A	Q5VTJ3	777 aa		11.45	□□□□□ -0.58
MSI2-217	ENST00000583705	OTOP2	Q7RTS6	562 aa		11.45	□□□□□ -0.58
MSI2-217	ENST00000583705	STK32C	Q86UX6	486 aa		11.45	□□□□□ -0.58
MSI2-217	ENST00000583705	SCUBE1	Q8IWY4	988 aa		11.45	□□□□□ -0.58
MSI2-217	ENST00000583705	NDUFAF1	Q9Y375	327 aa		11.45	□□□□□ -0.58
MSI2-217	ENST00000583705		A0A1W2PQC6	194 aa		11.45	□□□□□ -0.58
MSI2-217	ENST00000583705	TRIM64B	A6NI03	449 aa		11.45	□□□□□ -0.58
MSI2-217	ENST00000583705	NQO1	P15559	274 aa	Known RBP	11.45	□□□□□ -0.58
MSI2-217	ENST00000583705	CES1	P23141	567 aa		11.45	□□□□□ -0.58
MSI2-217	ENST00000583705	ARMC3	Q5W041	872 aa		11.45	□□□□□ -0.58
MSI2-217	ENST00000583705	PJA1	Q8NG27	643 aa		11.45	□□□□□ -0.58
MSI2-217	ENST00000583705	GTPBP2	Q9BX10	602 aa	Known RBP	11.45	□□□□□ -0.58
MSI2-217	ENST00000583705	STK39	Q9UEW8	545 aa		11.45	□□□□□ -0.58
MSI2-217	ENST00000583705	FOXP2	O15409	715 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	RPA1	P27694	616 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	IDH2	P48735	452 aa	Known RBP	11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	SOCS4	Q8WXH5	440 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	NSMCE2	Q96MF7	247 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	RASSF1	Q9NS23	344 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	TRPV2	Q9Y5S1	764 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	NEO1	Q92859	1461 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	SSNA1	O43805	119 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	PIRT	P0C851	137 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	PFKFB4	Q16877	469 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	SCIMP	Q6UWF3	145 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	ARMCX6	Q7L4S7	300 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	SLC41A1	Q8IVJ1	513 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	CD302	Q8IX05	232 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	ATL1	Q8WXF7	558 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	ARNTL2	Q8WYA1	636 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	ERP44	Q9BS26	406 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	NOL6	Q9H6R4	1146 aa	Known RBP	11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	PSMD13	Q9UNM6	376 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	LACTBL1	A8MY62	500 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	CYP11B1	P15538	503 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	NDUFA5	Q16718	116 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	XKR6	Q5GH73	641 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	METTL7B	Q6UX53	244 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	OR56A4	Q8NGH8	313 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	EEF1AKMT1	Q8WVE0	214 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	ING5	Q8WYH8	240 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	TMPRSS4	Q9NRS4	437 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	MRGBP	Q9NV56	204 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	TMA7	Q9Y2S6	64 aa	Known RBP	11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	MYO10	Q9HD67	2058 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	NPC1L1	Q9UHC9	1359 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	KCNA5	P22460	613 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	MAD2L1	Q13257	205 aa	Predicted RBP	11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	AMZ1	Q400G9	498 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	FAM126A	Q9BYI3	521 aa	Predicted RBP	11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	PTGFRN	Q9P2B2	879 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	PON1	P27169	355 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	EIF3M	Q7L2H7	374 aa	Known RBP	11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	ANKFN1	Q8N957	763 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	CAPSL	Q8WWF8	208 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	SLC27A6	Q9Y2P4	619 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	AP4S1	Q9Y587	144 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	MED24	O75448	989 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	SCNN1G	P51170	649 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	SEC24C	P53992	1094 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	TAS2R41	P59536	307 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	HYI	Q5T013	277 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	DEFB107A	Q8IZN7	70 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	NRDE2	Q9H7Z3	1164 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	PHF24	Q9UPV7	400 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	PBRM1	Q86U86	1689 aa		11.44	□□□□□ -0.58
MSI2-217	ENST00000583705	SLC28A2	O43868	658 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	CCT3	P49368	545 aa	Known RBP	11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	GDI2	P50395	445 aa	Known RBP	11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	ATXN1	P54253	815 aa	Known RBP	11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	ACSM2A	Q08AH3	577 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	FCHO2	Q0JRZ9	810 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	ACSM2B	Q68CK6	577 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	ADGRG6	Q86SQ4	1221 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	OR10H5	Q8NGA6	315 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	OR14C36	Q8NHC7	312 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	KBTBD7	Q8WVZ9	684 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	ZNF214	Q9UL59	606 aa	Predicted RBP	11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	URAD	A6NGE7	173 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	FCHO1	O14526	889 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	PLG	P00747	810 aa	Predicted RBP	11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	IL12RB1	P42701	662 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	RAB27A	P51159	221 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	MADCAM1	Q13477	382 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	GALNT3	Q14435	633 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	COL23A1	Q86Y22	540 aa	Predicted RBP	11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	SIRT2	Q8IXJ6	389 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	SERPINB11	Q96P15	392 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	ZIM3	Q96PE6	472 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	RNF121	Q9H920	327 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	AGO4	Q9HCK5	861 aa	Known RBP	11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	SLC9A3R1	O14745	358 aa	Predicted RBP	11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	PPP1R37	O75864	691 aa		11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	PTPN11	Q06124	597 aa	Predicted RBP	11.43	□□□□□ -0.58
MSI2-217	ENST00000583705	KRR1	Q13601	381 aa	Known RBP	11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms