RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PRKCHP24723 683 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 GLUD2P49448 558 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 PNLIPRP1P54315 467 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 HEPHL1Q6MZM0 1159 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 RINLQ6ZS11 566 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 TOGARAM2Q6ZUX3 1019 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 SCN4BQ8IWT1 228 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 LMO3Q8TAP4 145 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 CEP76Q8TAP6 659 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 C2CD4CQ8TF44 421 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 CDT1Q9H211 546 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 ABHD16BQ9H3Z7 469 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 KLHL31Q9H511 634 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 LRFN1Q9P244 771 aa4.37□□□□□ -1.71
COPS3-217ENST00000583160 TMEM247A6NEH6 219 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 VWA5AO00534 786 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 HNRNPRO43390 633 aaKnown RBP4.36□□□□□ -1.71
COPS3-217ENST00000583160 PLIN1O60240 522 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 PRSS2P07478 247 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 RRP1P56182 461 aaKnown RBP4.36□□□□□ -1.71
COPS3-217ENST00000583160 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
COPS3-217ENST00000583160 SHBQ15464 509 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 LRRC24Q50LG9 513 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 DGAT2L7PQ6IED9 249 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 SULT6B1Q6IMI4 303 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 RRAGAQ7L523 313 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 PTGR2Q8N8N7 351 aaPredicted RBP4.36□□□□□ -1.71
COPS3-217ENST00000583160 SLC35F5Q8WV83 523 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 FAR1Q8WVX9 515 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 FRG2BQ96QU4 278 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 VPS33BQ9H267 617 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 C6orf106Q9H6K1 298 aaPredicted RBP4.36□□□□□ -1.71
COPS3-217ENST00000583160 DACT1Q9NYF0 836 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 NDUFAF4Q9P032 175 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 KLQ9UEF7 1012 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 MST1RQ04912 1400 aa4.36□□□□□ -1.71
COPS3-217ENST00000583160 A0A0A0MQY5 61 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 ABHD14A-ACY1A0A1B0GW23 586 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 IFITM10A6NMD0 228 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 ACKR2O00590 384 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 HSPB6O14558 160 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 SYN3O14994 580 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 MYZAPP0CAP1 466 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 CHN1P15882 459 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 PDLIM4P50479 330 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 ICA1Q05084 483 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 HNF4GQ14541 408 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 GXYLT1Q4G148 440 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 SYTL3Q4VX76 610 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 TDRD12Q587J7 1177 aaKnown RBP4.35□□□□□ -1.71
COPS3-217ENST00000583160 SYCP2LQ5T4T6 812 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 TMEM268Q5VZI3 342 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 LIN54Q6MZP7 749 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 SYNE3Q6ZMZ3 975 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 Q6ZTC4 211 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 TRAPPC9Q96Q05 1148 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 RMDN3Q96TC7 470 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 CRB3Q9BUF7 120 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 IFT27Q9BW83 186 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 CADM1Q9BY67 442 aaKnown RBP4.35□□□□□ -1.71
COPS3-217ENST00000583160 CLPBQ9H078 707 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 ACAD9Q9H845 621 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 TMLHEQ9NVH6 421 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 KCND3Q9UK17 655 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 RAI2Q9Y5P3 530 aa4.35□□□□□ -1.71
COPS3-217ENST00000583160 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.34□□□□□ -1.71
COPS3-217ENST00000583160 FAM90A20PA6NIJ5 464 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 LDB2O43679 373 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 CCNT1O60563 726 aaKnown RBP4.34□□□□□ -1.71
COPS3-217ENST00000583160 CYP4B1P13584 511 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 GNLYP22749 145 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 AVPR2P30518 371 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 HTR3AP46098 478 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 CLCNKBP51801 687 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 ART1P52961 327 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 CDH12P55289 794 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 RPL36AP83881 106 aaKnown RBP4.34□□□□□ -1.71
COPS3-217ENST00000583160 HYAL1Q12794 435 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 PDCLQ13371 301 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 IZUMO4Q1ZYL8 232 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 ZNF284Q2VY69 593 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 PRSS57Q6UWY2 283 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 CLIP4Q8N3C7 705 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 OTUD7AQ8TE49 926 aaPredicted RBP4.34□□□□□ -1.71
COPS3-217ENST00000583160 HDAC7Q8WUI4 952 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 GFM1Q96RP9 751 aaKnown RBP4.34□□□□□ -1.71
COPS3-217ENST00000583160 ZNF700Q9H0M5 742 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 RMI1Q9H9A7 625 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 IL36RNQ9UBH0 155 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 PCDHGB1Q9Y5G3 927 aa4.34□□□□□ -1.71
COPS3-217ENST00000583160 C17orf102A2RUQ5 167 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 RNMTO43148 476 aaKnown RBP4.33□□□□□ -1.72
COPS3-217ENST00000583160 ASAP2O43150 1006 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 DDAH2O95865 285 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 ENO3P13929 434 aaPredicted RBP4.33□□□□□ -1.72
COPS3-217ENST00000583160 RFC1P35251 1148 aaPredicted RBP4.33□□□□□ -1.72
COPS3-217ENST00000583160 THPOP40225 353 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 RPS6KA3P51812 740 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 KRTAP10-7P60409 375 aaPredicted RBP4.33□□□□□ -1.72
COPS3-217ENST00000583160 TRAF2Q12933 501 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms