RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	RFX8	Q6ZV50	586 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	C2CD5	Q86YS7	1000 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	FTSJ3	Q8IY81	847 aa	Known RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	TEX19	Q8NA77	164 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	ATG16L2	Q8NAA4	619 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	OSR1	Q8TAX0	266 aa	Predicted RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	GRAPL	Q8TC17	118 aa	Predicted RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	IPO4	Q8TEX9	1081 aa	Known RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	MUL1	Q969V5	352 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	EID2B	Q96D98	161 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	RBM17	Q96I25	401 aa	Known RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	SENP7	Q9BQF6	1050 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	SH2D3A	Q9BRG2	576 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	QTRT1	Q9BXR0	403 aa	Known RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	ADGRE3	Q9BY15	652 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	RNF26	Q9BY78	433 aa	Predicted RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	SLC29A3	Q9BZD2	475 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	PDGFC	Q9NRA1	345 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	DACT1	Q9NYF0	836 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	VIRMA	Q69YN4	1812 aa	Known RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	TUBGCP6	Q96RT7	1819 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	WDR91	A4D1P6	747 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	TRIM38	O00635	465 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	CIAO1	O76071	339 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	GLP2R	O95838	553 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	MBP	P02686	304 aa	Predicted RBP	3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	DPEP1	P16444	411 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	MATN1	P21941	496 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	MMP8	P22894	467 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	ATP5F1	P24539	256 aa	Predicted RBP	3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	DUSP1	P28562	367 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	GALNS	P34059	522 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	ARHGAP25	P42331	645 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	ARL4C	P56559	192 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	WDR5	P61964	334 aa	Known RBP	3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	RAE1	P78406	368 aa	Known RBP	3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	SLC14A1	Q13336	389 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	PRKG1	Q13976	671 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	MAPRE1	Q15691	268 aa	Known RBP	3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	PFKFB3	Q16875	520 aa	Predicted RBP	3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	ARHGAP15	Q53QZ3	475 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	AWAT1	Q58HT5	328 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	TMEM196	Q5HYL7	178 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	ANO7	Q6IWH7	933 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	MMS22L	Q6ZRQ5	1243 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	CNGA4	Q8IV77	575 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	ANKRD18A	Q8IVF6	992 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	RPAP2	Q8IXW5	612 aa	Predicted RBP	3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	C16orf71	Q8IYS4	520 aa	Predicted RBP	3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	TMEM57	Q8N5G2	664 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	ANKRD44	Q8N8A2	993 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	STYX	Q8WUJ0	223 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	FRAT1	Q92837	279 aa	Predicted RBP	3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	RPL36AL	Q969Q0	106 aa	Known RBP	3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	PRR11	Q96HE9	360 aa	Predicted RBP	3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	UBXN10	Q96LJ8	280 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	KATNAL1	Q9BW62	490 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	SORBS1	Q9BX66	1292 aa	Known RBP	3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	SAP30L	Q9HAJ7	183 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	ITM2C	Q9NQX7	267 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	ZBTB40	Q9NUA8	1239 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	RRN3	Q9NYV6	651 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	KLHL13	Q9P2N7	655 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	ATP6V0A2	Q9Y487	856 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	TNFRSF18	Q9Y5U5	241 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	KIF13B	Q9NQT8	1826 aa		3.54	□□□□□ -1.84
MSI2-215	ENST00000582453	ARFGEF2	Q9Y6D5	1785 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	ANKRD18B	A2A2Z9	1011 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	KCNU1	A8MYU2	1149 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453		E5RJQ4	531 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	FCHO1	O14526	889 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	DHH	O43323	396 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	FAM155B	O75949	473 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	TNFRSF6B	O95407	300 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	AGR2	O95994	175 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	CENPB	P07199	599 aa	Predicted RBP	3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	SRGAP2B	P0DMP2	458 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	SFPQ	P23246	707 aa	Known RBP eCLIP	3.53	□□□□□ -1.84	1e-6	■■■□□ 15.2
MSI2-215	ENST00000582453	TACR3	P29371	465 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	CHRNA5	P30532	468 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	GSTM5	P46439	218 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	RFX5	P48382	616 aa	Predicted RBP	3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	PNLIPRP1	P54315	467 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	RPS8	P62241	208 aa	Known RBP	3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	GHRHR	Q02643	423 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	SEMA3B	Q13214	749 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	BFSP2	Q13515	415 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	SEC23B	Q15437	767 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	TRIP6	Q15654	476 aa	Known RBP	3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	CCDC57	Q2TAC2	916 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	EPHA10	Q5JZY3	1008 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	TMTC4	Q5T4D3	741 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	PIK3AP1	Q6ZUJ8	805 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	C15orf52	Q6ZUT6	534 aa	Known RBP	3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	TTC30A	Q86WT1	665 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	RASGRP3	Q8IV61	690 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	ITPRIP	Q8IWB1	547 aa		3.53	□□□□□ -1.84
MSI2-215	ENST00000582453	GALNT15	Q8N3T1	639 aa		3.53	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms