RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 LRPAP1P30533 357 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 HOXA6P31267 233 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 CXCR5P32302 372 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 CETN2P41208 172 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 ST13P50502 369 aaKnown RBP10.63□□□□□ -0.71
SS18-221ENST00000582448 SLC8A3P57103 927 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 SHC2P98077 582 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 CREB5Q02930 508 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 GPR17Q13304 367 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 ELF2Q15723 593 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 NKG7Q16617 165 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 DCUN1D2Q6PH85 259 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 RSRC2Q7L4I2 434 aaKnown RBP10.63□□□□□ -0.71
SS18-221ENST00000582448 ARMCX6Q7L4S7 300 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 MTERF4Q7Z6M4 381 aaKnown RBP10.63□□□□□ -0.71
SS18-221ENST00000582448 ITIH5Q86UX2 942 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 NT5DC3Q86UY8 548 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 CREG2Q8IUH2 290 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 TP53INP2Q8IXH6 220 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 C1orf131Q8NDD1 294 aaKnown RBP10.63□□□□□ -0.71
SS18-221ENST00000582448 PSMG2Q969U7 264 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 HES6Q96HZ4 224 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 WNT10AQ9GZT5 417 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 SDCBP2Q9H190 292 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 EBF3Q9H4W6 596 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 TASP1Q9H6P5 420 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 VPS45Q9NRW7 570 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 GDAP2Q9NXN4 497 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 ANAPC7Q9UJX3 599 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 ASB3Q9Y575 518 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 ALG6Q9Y672 507 aa10.63□□□□□ -0.71
SS18-221ENST00000582448 CFAP47Q6ZTR5 3102 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 GOLGA6L10A0A0M3HER8 536 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 C4orf47A7E2U8 309 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 M0QYV0 167 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 GFRA2O00451 464 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 ZNF185O15231 689 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 ERLIN1O75477 346 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 FGF19O95750 216 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 EGFP01133 1207 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 SETSIPP0DME0 302 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 GBP1P32455 592 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 CDH5P33151 784 aaPredicted RBP10.62□□□□□ -0.71
SS18-221ENST00000582448 GNL1P36915 607 aaPredicted RBP10.62□□□□□ -0.71
SS18-221ENST00000582448 RUNX3Q13761 415 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 SLBPQ14493 270 aaKnown RBP eCLIP10.62□□□□□ -0.71
SS18-221ENST00000582448 VEPH1Q14D04 833 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 SLC39A12Q504Y0 691 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 ODF2Q5BJF6 829 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 SEL1L2Q5TEA6 688 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 FSTL4Q6MZW2 842 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 ZNF572Q7Z3I7 529 aaPredicted RBP10.62□□□□□ -0.71
SS18-221ENST00000582448 COG1Q8WTW3 980 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 TFAP2BQ92481 460 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 C18orf8Q96DM3 657 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 EDEM2Q9BV94 578 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 SLC46A2Q9BY10 475 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 ELOVL4Q9GZR5 314 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 CARD9Q9H257 536 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 OBP2AQ9NY56 170 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 IP6K2Q9UHH9 426 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 PACSIN2Q9UNF0 486 aaPredicted RBP10.62□□□□□ -0.71
SS18-221ENST00000582448 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.62□□□□□ -0.71
SS18-221ENST00000582448 PCDHGA5Q9Y5G8 931 aa10.62□□□□□ -0.71
SS18-221ENST00000582448 PPEF2O14830 753 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 RHOBTB1O94844 696 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 TOP3BO95985 862 aaKnown RBP10.61□□□□□ -0.71
SS18-221ENST00000582448 ARSAP15289 507 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 COMTP21964 271 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 CDC25CP30307 473 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 SSR1P43307 286 aaKnown RBP10.61□□□□□ -0.71
SS18-221ENST00000582448 GALK1P51570 392 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 DGKEP52429 567 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 RWDD2BP57060 319 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 LILRA4P59901 499 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 MAMLD1Q13495 774 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 PPP2R5EQ16537 467 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 PLK5Q496M5 336 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 GLE1Q53GS7 698 aaKnown RBP10.61□□□□□ -0.71
SS18-221ENST00000582448 TMEM196Q5HYL7 178 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 DAB2IPQ5VWQ8 1189 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 PLEKHA7Q6IQ23 1121 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 CC2D1AQ6P1N0 951 aaPredicted RBP10.61□□□□□ -0.71
SS18-221ENST00000582448 DENND1BQ6P3S1 775 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 LCLAT1Q6UWP7 414 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 UNQ6494/PRO21346Q6UXR6 183 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 METTL23Q86XA0 190 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 ADGRF2Q8IZF7 708 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 TMEM86AQ8N2M4 240 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 MAB21L3Q8N8X9 362 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 KCT2Q8NC54 265 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 C3orf20Q8ND61 904 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 SPATA4Q8NEY3 305 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 ACTRT1Q8TDG2 376 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 CHFRQ96EP1 664 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 SENP8Q96LD8 212 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 ZSWIM1Q9BR11 485 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 MRPL45Q9BRJ2 306 aaKnown RBP10.61□□□□□ -0.71
SS18-221ENST00000582448 DUSP15Q9H1R2 295 aaPredicted RBP10.61□□□□□ -0.71
SS18-221ENST00000582448 GOLPH3Q9H4A6 298 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms