RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 ZNF148Q9UQR1 794 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 DRG1Q9Y295 367 aaKnown RBP9.73□□□□□ -0.85
RFFL-210ENST00000582308 KRBA1A5PL33 1030 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 TBC1D3BA6NDS4 549 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 ZSCAN5CA6NGD5 496 aaPredicted RBP9.72□□□□□ -0.85
RFFL-210ENST00000582308 CCDC188H7C350 402 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 K7EQS6 105 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 K7ERQ8 282 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 KCNK1O00180 336 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 MATN3O15232 486 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 KCNN4O15554 427 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 SMAD6O43541 496 aaKnown RBP9.72□□□□□ -0.85
RFFL-210ENST00000582308 TIMM44O43615 452 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 EGFP01133 1207 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 JCHAINP01591 159 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 CCNB1P14635 433 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 CD72P21854 359 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 CHRNA3P32297 505 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 TNFRSF4P43489 277 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 STK19P49842 368 aaPredicted RBP9.72□□□□□ -0.85
RFFL-210ENST00000582308 NRLP54845 237 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 IFI35P80217 286 aaPredicted RBP9.72□□□□□ -0.85
RFFL-210ENST00000582308 ECT2LQ008S8 904 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 SULT2A1Q06520 285 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 SLC20A2Q08357 652 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 SLC10A7Q0GE19 358 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 WASHC5Q12768 1159 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 ZBTB17Q13105 803 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 CYTH1Q15438 398 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 PREPLQ4J6C6 727 aaPredicted RBP9.72□□□□□ -0.85
RFFL-210ENST00000582308 TJAP1Q5JTD0 557 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 EMC10Q5UCC4 262 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 FSTL4Q6MZW2 842 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 CCDC137Q6PK04 289 aaKnown RBP9.72□□□□□ -0.85
RFFL-210ENST00000582308 CDKL3Q8IVW4 592 aaPredicted RBP9.72□□□□□ -0.85
RFFL-210ENST00000582308 SUGP1Q8IWZ8 645 aaKnown RBP9.72□□□□□ -0.85
RFFL-210ENST00000582308 KLHL7Q8IXQ5 586 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 UBALD2Q8IYN6 164 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 TEX26Q8N6G2 289 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 FAM71DQ8N9W8 422 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 LRRN4CLQ8ND94 238 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 ATL2Q8NHH9 583 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 MAML1Q92585 1016 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 ACDQ96AP0 544 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 MSANTD3Q96H12 275 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 MYO19Q96H55 970 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 RPL10LQ96L21 214 aaKnown RBP9.72□□□□□ -0.85
RFFL-210ENST00000582308 MRGPRX3Q96LB0 322 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 KRT12Q99456 494 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 IL12RB2Q99665 862 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 CIPCQ9C0C6 399 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 UBA2Q9UBT2 640 aaPredicted RBP9.72□□□□□ -0.85
RFFL-210ENST00000582308 WNT16Q9UBV4 365 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 SLCO3A1Q9UIG8 710 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 ERVW-1Q9UQF0 538 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 TECTAO75443 2155 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 VCANP13611 3396 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 TTC28Q96AY4 2481 aa9.72□□□□□ -0.85
RFFL-210ENST00000582308 CXorf51AA0A1B0GTR3 108 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 RNF103O00237 685 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 MTSS1O43312 755 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 ASLP04424 464 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 ATP5BP06576 529 aaKnown RBP9.71□□□□□ -0.86
RFFL-210ENST00000582308 DLDP09622 509 aaKnown RBP9.71□□□□□ -0.86
RFFL-210ENST00000582308 ETS1P14921 441 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 PTPN3P26045 913 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 PTGIRP43119 386 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 FNTAP49354 379 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 SERPINH1P50454 418 aaKnown RBP9.71□□□□□ -0.86
RFFL-210ENST00000582308 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
RFFL-210ENST00000582308 GDF10P55107 478 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 PRKCQQ04759 706 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 HNRNPDQ14103 355 aaKnown RBP9.71□□□□□ -0.86
RFFL-210ENST00000582308 LBRQ14739 615 aaKnown RBP9.71□□□□□ -0.86
RFFL-210ENST00000582308 EIF4HQ15056 248 aaKnown RBP9.71□□□□□ -0.86
RFFL-210ENST00000582308 PTPRNQ16849 979 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 INO80DQ53TQ3 878 aaPredicted RBP9.71□□□□□ -0.86
RFFL-210ENST00000582308 TMCO4Q5TGY1 634 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 HEATR6Q6AI08 1181 aaKnown RBP9.71□□□□□ -0.86
RFFL-210ENST00000582308 TIGD7Q6NT04 549 aaPredicted RBP9.71□□□□□ -0.86
RFFL-210ENST00000582308 RETSATQ6NUM9 610 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 PRUNE1Q86TP1 453 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 ZNF687Q8N1G0 1237 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 PGBD5Q8N414 524 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 SH2D3CQ8N5H7 860 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 ALLCQ8N6M5 410 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 CNTD1Q8N815 330 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 CEP112Q8N8E3 955 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 GLIS1Q8NBF1 620 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 NOA1Q8NC60 698 aaKnown RBP9.71□□□□□ -0.86
RFFL-210ENST00000582308 MNS1Q8NEH6 495 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 USP33Q8TEY7 942 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 HTR3CQ8WXA8 447 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 FAM3CQ92520 227 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 RTP4Q96DX8 246 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 ZNF599Q96NL3 588 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 CEP41Q9BYV8 373 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 ARHGEF3Q9NR81 526 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 SEPT10Q9P0V9 454 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 PCYOX1Q9UHG3 505 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms