RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 MTRRQ9UBK8 725 aa23.08■■□□□ 1.29
CCDC47-204ENST00000582252 PLLPQ9Y342 182 aa23.08■■□□□ 1.29
CCDC47-204ENST00000582252 PCDHB12Q9Y5F1 795 aa23.08■■□□□ 1.29
CCDC47-204ENST00000582252 BACE2Q9Y5Z0 518 aa23.08■■□□□ 1.29
CCDC47-204ENST00000582252 CDY1Q9Y6F8 540 aa23.08■■□□□ 1.29
CCDC47-204ENST00000582252 NYNRINQ9P2P1 1898 aaKnown RBP23.08■■□□□ 1.29
CCDC47-204ENST00000582252 TROVE2P10155 538 aaKnown RBP eCLIP23.08■■□□□ 1.28
CCDC47-204ENST00000582252 GP5P40197 560 aa23.08■■□□□ 1.28
CCDC47-204ENST00000582252 RASIP1Q5U651 963 aa23.08■■□□□ 1.28
CCDC47-204ENST00000582252 CGB2Q6NT52 195 aa23.08■■□□□ 1.28
CCDC47-204ENST00000582252 RSPO2Q6UXX9 243 aaPredicted RBP23.08■■□□□ 1.28
CCDC47-204ENST00000582252 CNTD1Q8N815 330 aa23.08■■□□□ 1.28
CCDC47-204ENST00000582252 CCDC63Q8NA47 563 aa23.08■■□□□ 1.28
CCDC47-204ENST00000582252 PDZD8Q8NEN9 1154 aa23.08■■□□□ 1.28
CCDC47-204ENST00000582252 GPR152Q8TDT2 470 aa23.08■■□□□ 1.28
CCDC47-204ENST00000582252 ATP2A3Q93084 1043 aa23.08■■□□□ 1.28
CCDC47-204ENST00000582252 TTLL2Q9BWV7 592 aa23.08■■□□□ 1.28
CCDC47-204ENST00000582252 UBE2OQ9C0C9 1292 aaKnown RBP23.08■■□□□ 1.28
CCDC47-204ENST00000582252 MPP6Q9NZW5 540 aa23.08■■□□□ 1.28
CCDC47-204ENST00000582252 STK39Q9UEW8 545 aa23.08■■□□□ 1.28
CCDC47-204ENST00000582252 SOX13Q9UN79 622 aa23.08■■□□□ 1.28
CCDC47-204ENST00000582252 DOCK4Q8N1I0 1966 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 SLC12A8A0AV02 714 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 SLC38A8A6NNN8 435 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 H0YHG0 523 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 TLL1O43897 1013 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 USP12O75317 370 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 SOAT2O75908 522 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 SOD2P04179 222 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 CRHR1P34998 444 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 PAPOLAP51003 745 aaKnown RBP23.07■■□□□ 1.28
CCDC47-204ENST00000582252 SF3A3Q12874 501 aaKnown RBP eCLIP23.07■■□□□ 1.28
CCDC47-204ENST00000582252 PSMD5Q16401 504 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 SLC8B1Q6J4K2 584 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 ARHGAP36Q6ZRI8 547 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 CCDC117Q8IWD4 279 aaPredicted RBP23.07■■□□□ 1.28
CCDC47-204ENST00000582252 ZNF276Q8N554 614 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 SP7Q8TDD2 431 aaPredicted RBP23.07■■□□□ 1.28
CCDC47-204ENST00000582252 OVCA2Q8WZ82 227 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 TBL1YQ9BQ87 522 aa23.07■■□□□ 1.28
CCDC47-204ENST00000582252 IPO11Q9UI26 975 aaKnown RBP23.07■■□□□ 1.28
CCDC47-204ENST00000582252 IGLV3-10A0A075B6K4 115 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 VNN2O95498 520 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 IGLV3-27P01718 113 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 ZDHHC11BP0C7U3 371 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 ALDH3A1P30838 453 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 ANKRD20A4Q4UJ75 823 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 ARTNQ5T4W7 220 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 STXBP5Q5T5C0 1151 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 PRSS55Q6UWB4 352 aaPredicted RBP23.06■■□□□ 1.28
CCDC47-204ENST00000582252 MIB1Q86YT6 1006 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 ZNF683Q8IZ20 524 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 NDUFAF2Q8N183 169 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 ZNF398Q8TD17 642 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 NSMCE1Q8WV22 266 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 CLP1Q92989 425 aaKnown RBP23.06■■□□□ 1.28
CCDC47-204ENST00000582252 ENTPD7Q9NQZ7 604 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 RBM22Q9NW64 420 aaKnown RBP eCLIP23.06■■□□□ 1.283e-6■■■■□ 21.1
CCDC47-204ENST00000582252 NSMCE4AQ9NXX6 385 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 HBS1LQ9Y450 684 aaKnown RBP23.06■■□□□ 1.28
CCDC47-204ENST00000582252 USH1CQ9Y6N9 552 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 CAPN7Q9Y6W3 813 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 GBF1Q92538 1859 aa23.06■■□□□ 1.28
CCDC47-204ENST00000582252 WDR91A4D1P6 747 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 ATP9BO43861 1147 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 SERPINB4P48594 390 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 RENBPP51606 427 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 DBN1Q16643 649 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 ARMC3Q5W041 872 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 KIAA1841Q6NSI8 718 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 OTOP3Q7RTS5 596 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 TAS1R1Q7RTX1 841 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 SPOCK2Q92563 424 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 HERC2P3Q9BVR0 1158 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 VN1R3Q9BXE9 311 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 CRISPLD1Q9H336 500 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 RXFP1Q9HBX9 757 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 PCMTD2Q9NV79 361 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 KLF11O14901 512 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 TLR5O60602 858 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 SPRP35270 261 aaPredicted RBP23.05■■□□□ 1.28
CCDC47-204ENST00000582252 SCTRP47872 440 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 CCDC15Q0P6D6 951 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 OLIG2Q13516 323 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 HNRNPDQ14103 355 aaKnown RBP23.05■■□□□ 1.28
CCDC47-204ENST00000582252 UNC5BQ8IZJ1 945 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 TNS4Q8IZW8 715 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 RAB3IL1Q8TBN0 382 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 SLC13A1Q9BZW2 595 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 SLCO1B3Q9NPD5 702 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 NDFIP2Q9NV92 336 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 HSFX1Q9UBD0 423 aa23.05■■□□□ 1.28
CCDC47-204ENST00000582252 GLRA3O75311 464 aa23.04■■□□□ 1.28
CCDC47-204ENST00000582252 IL1BP01584 269 aa23.04■■□□□ 1.28
CCDC47-204ENST00000582252 ITGA2BP08514 1039 aa23.04■■□□□ 1.28
CCDC47-204ENST00000582252 MAGEA10P43363 369 aaPredicted RBP23.04■■□□□ 1.28
CCDC47-204ENST00000582252 PDE1BQ01064 536 aa23.04■■□□□ 1.28
CCDC47-204ENST00000582252 SETDB1Q15047 1291 aa23.04■■□□□ 1.28
CCDC47-204ENST00000582252 CERCAMQ5T4B2 595 aa23.04■■□□□ 1.28
CCDC47-204ENST00000582252 ATG16L1Q676U5 607 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms