RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 HTR3CQ8WXA8 447 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TBC1D31Q96DN5 1066 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CFAP36Q96G28 342 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ZFRQ96KR1 1074 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 GDF15Q99988 308 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 APOL5Q9BWW9 433 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 SLC39A8Q9C0K1 460 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PAK5Q9P286 719 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 A8MUI8 341 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 H3BNC9 293 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SLC2A3P11169 496 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CA4P22748 312 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ERVK-21P61565 698 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ELF3P78545 371 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SMAD3P84022 425 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CBX2Q14781 532 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SLC5A9Q2M3M2 681 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 POTEHQ6S545 545 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CCDC149Q6ZUS6 474 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ITIH5Q86UX2 942 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ARHGAP12Q8IWW6 846 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 LGI2Q8N0V4 545 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 FITM2Q8N6M3 262 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ATP6V0D2Q8N8Y2 350 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 USP33Q8TEY7 942 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 QKIQ96PU8 341 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PAFAH2Q99487 392 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 WDR83Q9BRX9 315 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PIH1D1Q9NWS0 290 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 EURLQ9NYK6 297 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 DNMT3BQ9UBC3 853 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 RABGEF1Q9UJ41 708 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PCDHA11Q9Y5I1 949 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CPQQ9Y646 472 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 WDR91A4D1P6 747 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 LPXNO60711 386 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CKMP06732 381 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SLC8A1P32418 973 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 GBP2P32456 591 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 MSH2P43246 934 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 HARS2P49590 506 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 WASHC5Q12768 1159 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 NR1H3Q13133 447 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PPP1R21Q6ZMI0 780 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 IGDCC3Q8IVU1 814 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ADAMTS19Q8TE59 1207 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ZNF419Q96HQ0 510 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 C1orf74Q96LT6 269 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CEP295NLQ96MC4 621 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 KLF16Q9BXK1 252 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SLC46A2Q9BY10 475 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CCDC134Q9H6E4 229 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 NOL6Q9H6R4 1146 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ETNK1Q9HBU6 452 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 STK39Q9UEW8 545 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 AGO1Q9UL18 857 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 RWDD3Q9Y3V2 267 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 IKBKGQ9Y6K9 419 aa12.95□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ATP6V1G2O95670 118 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 RB1P06400 928 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 RPA3P35244 121 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CLNS1AP54105 237 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 OLIG2Q13516 323 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 GRASPQ7Z6J2 395 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 OR52K2Q8NGK3 314 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CKAP2Q8WWK9 683 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 OVCA2Q8WZ82 227 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 AGAP3Q96P47 875 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 IGFLR1Q9H665 355 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 BAIAP2L1Q9UHR4 511 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CCL26Q9Y258 94 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 USP15Q9Y4E8 981 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 RNF103O00237 685 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CLGNO14967 610 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ACSL4O60488 711 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 KRT4P19013 534 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 TACR2P21452 398 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 GARSP41250 739 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 GRIA1P42261 906 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 NRIP1P48552 1158 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 COG7P83436 770 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 IL9RQ01113 521 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 RING1Q06587 406 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ZBTB17Q13105 803 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 KCNJ11Q14654 390 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PDK1Q15118 436 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 KLHL38Q2WGJ6 581 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CDKL3Q8IVW4 592 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 TNS4Q8IZW8 715 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ING5Q8WYH8 240 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SLC28A3Q9HAS3 691 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 NOD2Q9HC29 1040 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 UXTQ9UBK9 157 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SLC24A2Q9UI40 661 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ACTL7BQ9Y614 415 aa12.94□□□□□ -0.34
CDK5RAP3-217ENST00000580287 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CCDC195A0A1B0GUA6 201 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CCDC189A1A4V9 331 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms