RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ABHD4Q8TB40 342 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 FAM71BQ8TC56 605 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 WFDC5Q8TCV5 224 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 IPO4Q8TEX9 1081 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 DEPDC1BQ8WUY9 529 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 OSCP1Q8WVF1 389 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 RXFP2Q8WXD0 754 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 DNASE1L2Q92874 299 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 AZIN2Q96A70 460 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 VOPP1Q96AW1 172 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ACSF2Q96CM8 615 aaPredicted RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 CFAP57Q96MR6 1250 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 UHRF1Q96T88 793 aaPredicted RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 DNAI2Q9GZS0 605 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 LINC00597Q9H2U6 94 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ZFP14Q9HCL3 533 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 FBRSL1Q9HCM7 1045 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 CD248Q9HCU0 757 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 TRPC7Q9HCX4 862 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ST7Q9NRC1 585 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 OLA1Q9NTK5 396 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 SMPD4Q9NXE4 827 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 MARCH2Q9P0N8 246 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 DLGAP2Q9P1A6 1054 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 CFAP97Q9P2B7 532 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 WDR35Q9P2L0 1181 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 CNOT8Q9UFF9 292 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 MUTYHQ9UIF7 546 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 RASAL2Q9UJF2 1139 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 FBXO10Q9UK96 956 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 AGO1Q9UL18 857 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 INTUQ9ULD6 942 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 CNOT6Q9ULM6 557 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 STRIP2Q9ULQ0 834 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 CLEC4EQ9ULY5 219 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 SORCS3Q9UPU3 1222 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 FAM50BQ9Y247 325 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 TLR6Q9Y2C9 796 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 NR2E1Q9Y466 385 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 WNT6Q9Y6F9 365 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 CACNA1HO95180 2353 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ADAMTS9Q9P2N4 1935 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 A0A0A6YYK5 440 aaPredicted RBP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 GOLGA6L7A0A1B0GV03 622 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 SLC12A8A0AV02 714 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 BTNL10A8MVZ5 291 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 PI4K2BG5E9Z4 385 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 FAM72CH0Y354 149 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 M0QYT0 321 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 TRIM24O15164 1050 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 FANCGO15287 622 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CACNG3O60359 315 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 PDGFBP01127 241 aaPredicted RBP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CTSBP07858 339 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CISD3P0C7P0 127 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CCDC172P0C7W6 258 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 MYBL1P10243 752 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 RALAP11233 206 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 KRT3P12035 628 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 NCAM1P13591 858 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 GLULP15104 373 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 RAC2P15153 192 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 ABCB4P21439 1286 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 GPD1P21695 349 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 IL1R2P27930 398 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 HOXD9P28356 352 aaPredicted RBP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CORO1AP31146 461 aaKnown RBP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 GJA4P35212 333 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 AVPR1AP37288 418 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 SOX9P48436 509 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 SULT1E1P49888 294 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 ZNF143P52747 638 aaPredicted RBP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 VCPP55072 806 aaKnown RBP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 TBX4P57082 545 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 SLC8A3P57103 927 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 STARD6P59095 220 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 TAS2R40P59535 323 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 ZXDAP98168 799 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 DHCR24Q15392 516 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 TAZQ16635 292 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CA9Q16790 459 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 ARHGAP29Q52LW3 1261 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 DCAF6Q58WW2 860 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 ZC3H12AQ5D1E8 599 aaKnown RBP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 MS4A13Q5J8X5 152 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CCDC122Q5T0U0 273 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 FAM72AQ5TYM5 149 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 BTBD8Q5XKL5 378 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 TMEM215Q68D42 235 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 FAM72DQ6L9T8 149 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 FSTL4Q6MZW2 842 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CXorf57Q6NSI4 855 aaKnown RBP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 PPP1R2P3Q6NXS1 205 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 C16orf46Q6P387 395 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 DNAJC24Q6P3W2 148 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 ZNF662Q6ZS27 426 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 ANKS1BQ7Z6G8 1248 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 SLFN11Q7Z7L1 901 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 C14orf80Q86SX3 495 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 FAM72BQ86X60 149 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms