RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 OSCP1Q8WVF1 389 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 IGSF8Q969P0 613 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 RSPRY1Q96DX4 576 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 RPRD1AQ96P16 312 aaPredicted RBP8.22□□□□□ -1.09
COPS3-215ENST00000578317 FAM83CQ9BQN1 747 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 KLC2Q9H0B6 622 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 BRD8Q9H0E9 1235 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 LRRC19Q9H756 370 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 THG1LQ9NWX6 298 aaKnown RBP8.22□□□□□ -1.09
COPS3-215ENST00000578317 ZNF212Q9UDV6 495 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 TBC1D30Q9Y2I9 924 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 MYH10P35580 1976 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 A0A1B0GVM2 712 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 TCRBV7S2A1N4TA0A589 114 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 TCAF2A6NFQ2 919 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 HEPACAM2A8MVW5 462 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 CCDC188H7C350 402 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 KRIT1O00522 736 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 ZNF189O75820 626 aaPredicted RBP8.21□□□□□ -1.09
COPS3-215ENST00000578317 GBP2P32456 591 aaPredicted RBP8.21□□□□□ -1.09
COPS3-215ENST00000578317 SERPINB6P35237 376 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 VIPR2P41587 438 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 MAPKAPK2P49137 400 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 YBEYP58557 167 aaPredicted RBP8.21□□□□□ -1.09
COPS3-215ENST00000578317 XRCC4Q13426 336 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 PDGFRLQ15198 375 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 SMAD2Q15796 467 aaKnown RBP8.21□□□□□ -1.09
COPS3-215ENST00000578317 AFMIDQ63HM1 303 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 KAZNQ674X7 775 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 NCBP2-AS2Q69YL0 99 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 RWDD4Q6NW29 188 aaKnown RBP8.21□□□□□ -1.09
COPS3-215ENST00000578317 TMCO3Q6UWJ1 677 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 RFX6Q8HWS3 928 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 LGI2Q8N0V4 545 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 TDRD5Q8NAT2 981 aaKnown RBP8.21□□□□□ -1.09
COPS3-215ENST00000578317 SLC35B2Q8TB61 432 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 P3H4Q92791 437 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 IRF7Q92985 503 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 NKD2Q969F2 451 aaPredicted RBP8.21□□□□□ -1.09
COPS3-215ENST00000578317 CAPZA3Q96KX2 299 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 PRICKLE1Q96MT3 831 aaPredicted RBP8.21□□□□□ -1.09
COPS3-215ENST00000578317 PHF7Q9BWX1 381 aaPredicted RBP8.21□□□□□ -1.09
COPS3-215ENST00000578317 LINC00597Q9H2U6 94 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 ETNK2Q9NVF9 386 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 DTLQ9NZJ0 730 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 MARK1Q9P0L2 795 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 FEZ2Q9UHY8 353 aaPredicted RBP8.21□□□□□ -1.09
COPS3-215ENST00000578317 FAM50BQ9Y247 325 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 DRG1Q9Y295 367 aaKnown RBP8.21□□□□□ -1.09
COPS3-215ENST00000578317 NR2E1Q9Y466 385 aa8.21□□□□□ -1.09
COPS3-215ENST00000578317 NOTCH4Q99466 2003 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 GOLGA6L10A0A0M3HER8 536 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 ILVBLA1L0T0 632 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 CNTN5O94779 1100 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 PENKP01210 267 aaPredicted RBP8.21□□□□□ -1.1
COPS3-215ENST00000578317 CYBBP04839 570 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 EDN3P14138 238 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 PSMC3P17980 439 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 MX2P20592 715 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 STIP1P31948 543 aaKnown RBP8.21□□□□□ -1.1
COPS3-215ENST00000578317 OXCT1P55809 520 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 RPS24P62847 133 aaKnown RBP8.21□□□□□ -1.1
COPS3-215ENST00000578317 SLC10A2Q12908 348 aaPredicted RBP8.21□□□□□ -1.1
COPS3-215ENST00000578317 NOMO1Q15155 1222 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 LLGL1Q15334 1064 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 DBN1Q16643 649 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 ALFQ53S48 1182 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 FYB2Q5VWT5 728 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 RFWD3Q6PCD5 774 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 RHBDF2Q6PJF5 856 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 VITQ6UXI7 678 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 ZNF783Q6ZMS7 281 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 ERMP1Q7Z2K6 904 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 SETD3Q86TU7 594 aaPredicted RBP8.21□□□□□ -1.1
COPS3-215ENST00000578317 C12orf50Q8NA57 414 aaPredicted RBP8.21□□□□□ -1.1
COPS3-215ENST00000578317 HJURPQ8NCD3 748 aaPredicted RBP8.21□□□□□ -1.1
COPS3-215ENST00000578317 FIBINQ8TAL6 211 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 FATE1Q969F0 183 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 MYEOVQ96EZ4 313 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 RUNDC3BQ96NL0 473 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 OLFM3Q96PB7 478 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 TSGA13Q96PP4 275 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 SLC2A11Q9BYW1 496 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 ZCCHC2Q9C0B9 1178 aaKnown RBP8.21□□□□□ -1.1
COPS3-215ENST00000578317 SPHK2Q9NRA0 654 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 DUS2Q9NX74 493 aaKnown RBP8.21□□□□□ -1.1
COPS3-215ENST00000578317 MPP6Q9NZW5 540 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 FBXO10Q9UK96 956 aa8.21□□□□□ -1.1
COPS3-215ENST00000578317 ZNF638Q14966 1978 aaKnown RBP8.2□□□□□ -1.1
COPS3-215ENST00000578317 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.2□□□□□ -1.1
COPS3-215ENST00000578317 CXorf51AA0A1B0GTR3 108 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 TYW5A2RUC4 315 aaKnown RBP8.2□□□□□ -1.1
COPS3-215ENST00000578317 CTAGE15A4D2H0 777 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 HACD1B0YJ81 288 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 CHADO15335 359 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 HOXC11O43248 304 aaPredicted RBP8.2□□□□□ -1.1
COPS3-215ENST00000578317 LIASO43766 372 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 CTAGE8P0CG41 777 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 OR1E1P30953 314 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 CHRNA3P32297 505 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms