RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 HAUS1Q96CS2 278 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 PIWIL1Q96J94 861 aaKnown RBP10.45□□□□□ -0.74
SS18-207ENST00000577636 C8orf48Q96LL4 319 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 SLC2A13Q96QE2 648 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 KCNK16Q96T55 309 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 PKMYT1Q99640 499 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 FERMT1Q9BQL6 677 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 TRIM31Q9BZY9 425 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 TSPYL1Q9H0U9 437 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 FBXO44Q9H4M3 255 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 FAM204AQ9H8W3 233 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 OGFRQ9NZT2 677 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 CFAP97Q9P2B7 532 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 PILRBQ9UKJ0 227 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 DRG1Q9Y295 367 aaKnown RBP10.45□□□□□ -0.74
SS18-207ENST00000577636 GON4LQ3T8J9 2241 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 ASCC3Q8N3C0 2202 aaKnown RBP10.44□□□□□ -0.74
SS18-207ENST00000577636 H0Y626 953 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 APOC4-APOC2K7ER74 178 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 M0QYT0 321 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 SLC9A3R1O14745 358 aaPredicted RBP10.44□□□□□ -0.74
SS18-207ENST00000577636 APOL1O14791 398 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 ZBTB24O43167 697 aaPredicted RBP10.44□□□□□ -0.74
SS18-207ENST00000577636 LIASO43766 372 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 SH3BP5O60239 455 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 CST8O60676 142 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 ADAM23O75077 832 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 ZNF189O75820 626 aaPredicted RBP10.44□□□□□ -0.74
SS18-207ENST00000577636 GABBR2O75899 941 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 TRIM16O95361 564 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 APOC2P02655 101 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 ADH5P11766 374 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 NCAM1P13591 858 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 TCF3P15923 654 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 ADCY8P40145 1251 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 GRIA2P42262 883 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 PTGIRP43119 386 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 MAGEA11P43364 429 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 TNFRSF4P43489 277 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 KIR2DL1P43626 348 aaPredicted RBP10.44□□□□□ -0.74
SS18-207ENST00000577636 HDAC4P56524 1084 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 ZNF33AQ06730 810 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 NME3Q13232 169 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 PTK6Q13882 451 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 SIX1Q15475 284 aaPredicted RBP10.44□□□□□ -0.74
SS18-207ENST00000577636 PPP6R3Q5H9R7 873 aaPredicted RBP10.44□□□□□ -0.74
SS18-207ENST00000577636 EFHC2Q5JST6 749 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 BTBD8Q5XKL5 378 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 DUPD1Q68J44 220 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 TXNRD3NBQ6F5E7 133 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 PM20D1Q6GTS8 502 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 TTC27Q6P3X3 843 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 BZW1Q7L1Q6 419 aaKnown RBP10.44□□□□□ -0.74
SS18-207ENST00000577636 BEND5Q7L4P6 421 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 RNF139Q8WU17 664 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 ATG4AQ8WYN0 398 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 SEC14L1Q92503 715 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 P3H4Q92791 437 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 RNF34Q969K3 372 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 SNF8Q96H20 258 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 FMO2Q99518 471 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 ZNF670Q9BS34 389 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 TRIM51Q9BSJ1 452 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 SNRNP25Q9BV90 132 aaKnown RBP10.44□□□□□ -0.74
SS18-207ENST00000577636 FUT8Q9BYC5 575 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 DHX35Q9H5Z1 703 aaKnown RBP10.44□□□□□ -0.74
SS18-207ENST00000577636 ABCC13Q9NSE7 274 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 ZNF446Q9NWS9 450 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 AP4E1Q9UPM8 1137 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 TSC2P49815 1807 aa10.44□□□□□ -0.74
SS18-207ENST00000577636 SYNJ2BP-COX16A0A087WUM0 186 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 ZNF840PA6NDX5 716 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 ZSCAN5CA6NGD5 496 aaPredicted RBP10.43□□□□□ -0.74
SS18-207ENST00000577636 C3orf70A6NLC5 250 aaPredicted RBP10.43□□□□□ -0.74
SS18-207ENST00000577636 YJEFN3A6XGL0 299 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 HHLA1C9JL84 531 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 E7ENQ6 273 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 H3BRJ5 948 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 ARHGAP33O14559 1287 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 ENDOD1O94919 500 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 RTN3O95197 1032 aaPredicted RBP10.43□□□□□ -0.74
SS18-207ENST00000577636 ADH1CP00326 375 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 ITGAVP06756 1048 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 SYPP08247 313 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 SERPINF2P08697 491 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 ITIH2P19823 946 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 TGM2P21980 687 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 ACTN2P35609 894 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 DPP6P42658 865 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 KCNJ1P48048 391 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 ZNF135P52742 658 aaPredicted RBP10.43□□□□□ -0.74
SS18-207ENST00000577636 SLC5A3P53794 718 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 YWHAGP61981 247 aaKnown RBP eCLIP10.43□□□□□ -0.74
SS18-207ENST00000577636 SLC7A9P82251 487 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 TAF10Q12962 218 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 DPYSL3Q14195 570 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 TRIP6Q15654 476 aaKnown RBP10.43□□□□□ -0.74
SS18-207ENST00000577636 TAZQ16635 292 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 COL28A1Q2UY09 1125 aa10.43□□□□□ -0.74
SS18-207ENST00000577636 ANO4Q32M45 955 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms