RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 BAP1Q92560 729 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 KLK6Q92876 244 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 ARRDC3Q96B67 414 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 C1orf74Q96LT6 269 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 NAP1L5Q96NT1 182 aaPredicted RBP12.18□□□□□ -0.46
LITAF-219ENST00000576334 HAPLN3Q96S86 360 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 AGPAT1Q99943 283 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 PPM1HQ9ULR3 514 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 FZD4Q9ULV1 537 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 SCML1Q9UN30 329 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 NEU3Q9UQ49 428 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 HS3ST2Q9Y278 367 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 CABIN1Q9Y6J0 2220 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 DMXL2Q8TDJ6 3036 aa12.18□□□□□ -0.46
LITAF-219ENST00000576334 LRRC72A6NJI9 287 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 GOLGA8CPA6NN73 597 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 MCF2LO15068 1137 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 CCP110O43303 1012 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 ATMINO43313 823 aaPredicted RBP12.17□□□□□ -0.46
LITAF-219ENST00000576334 CBFA2T3O75081 653 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 ZMPSTE24O75844 475 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 CD160O95971 181 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 KRT3P12035 628 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 GKP32189 559 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 GRIA4P48058 902 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 OXCT1P55809 520 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 ARF5P84085 180 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 OGDHQ02218 1023 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 TRIP6Q15654 476 aaKnown RBP12.17□□□□□ -0.46
LITAF-219ENST00000576334 ST3GAL2Q16842 350 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 MANEALQ5VSG8 457 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 RWDD4Q6NW29 188 aaKnown RBP12.17□□□□□ -0.46
LITAF-219ENST00000576334 ARCQ7LC44 396 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 ADAT2Q7Z6V5 191 aaKnown RBP12.17□□□□□ -0.46
LITAF-219ENST00000576334 SETD3Q86TU7 594 aaPredicted RBP12.17□□□□□ -0.46
LITAF-219ENST00000576334 SLCO6A1Q86UG4 719 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 PHF13Q86YI8 300 aaPredicted RBP12.17□□□□□ -0.46
LITAF-219ENST00000576334 ANKRD20A12PQ8NF67 263 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 GRIN3AQ8TCU5 1115 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 CENPIQ92674 756 aaPredicted RBP12.17□□□□□ -0.46
LITAF-219ENST00000576334 SYT11Q9BT88 431 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 FUCA2Q9BTY2 467 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 ZDHHC5Q9C0B5 715 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 ZYG11BQ9C0D3 744 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
LITAF-219ENST00000576334 AASDHPPTQ9NRN7 309 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 ARHGAP20Q9P2F6 1191 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 OR12D3Q9UGF7 316 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 DNAI1Q9UI46 699 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 PCOLCE2Q9UKZ9 415 aa12.17□□□□□ -0.46
LITAF-219ENST00000576334 CHD5Q8TDI0 1954 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 A0A1W2PR77 199 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 LRRC53A6NM62 1247 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 KPNA3O00505 521 aaPredicted RBP12.16□□□□□ -0.46
LITAF-219ENST00000576334 LRIG2O94898 1065 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 CER1O95813 267 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 GPD1P21695 349 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 CHRNA3P32297 505 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 CTSKP43235 329 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 PTPN9P43378 593 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 VASPP50552 380 aaPredicted RBP12.16□□□□□ -0.46
LITAF-219ENST00000576334 RACK1P63244 317 aaKnown RBP12.16□□□□□ -0.46
LITAF-219ENST00000576334 KRT83P78385 493 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 SLC14A1Q13336 389 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 C6orf118Q5T5N4 469 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 C22orf39Q6P5X5 142 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 LRSAM1Q6UWE0 723 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 TRIM72Q6ZMU5 477 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 DPY19L3Q6ZPD9 716 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 NLRP14Q86W24 1093 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 MARCH9Q86YJ5 346 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 GATAD2AQ86YP4 633 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 DCAF4L2Q8NA75 395 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 C3orf20Q8ND61 904 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 FAM131CQ96AQ9 280 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 SERAC1Q96JX3 654 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 MCEEQ96PE7 176 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 MYOCQ99972 504 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 C2orf49Q9BVC5 232 aaPredicted RBP12.16□□□□□ -0.46
LITAF-219ENST00000576334 SELENOOQ9BVL4 669 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 TMEM121BQ9BXQ6 578 aaPredicted RBP12.16□□□□□ -0.46
LITAF-219ENST00000576334 ATP13A1Q9HD20 1204 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 FCF1Q9Y324 198 aaKnown RBP12.16□□□□□ -0.46
LITAF-219ENST00000576334 PAXBP1Q9Y5B6 917 aa12.16□□□□□ -0.46
LITAF-219ENST00000576334 IGF2RP11717 2491 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 CACNA1BQ00975 2339 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 ILVBLA1L0T0 632 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 SIGLEC16A6NMB1 481 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 VILLO15195 856 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 PLRG1O43660 514 aaKnown RBP12.15□□□□□ -0.46
LITAF-219ENST00000576334 PLEKP08567 350 aaPredicted RBP12.15□□□□□ -0.46
LITAF-219ENST00000576334 ATXN1LP0C7T5 689 aaKnown RBP12.15□□□□□ -0.46
LITAF-219ENST00000576334 FTH1P19P0C7X4 201 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 PRLRP16471 622 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 ZNF165P49910 485 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 DNA2P51530 1060 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 GNA12Q03113 381 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 MTA1Q13330 715 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 IQCB1Q15051 598 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 SHBQ15464 509 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms