RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 LRRC8AQ8IWT6 810 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 CPXM2Q8N436 756 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 CADM4Q8NFZ8 388 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 BAHD1Q8TBE0 780 aaPredicted RBP13.69□□□□□ -0.22
CCDC40-205ENST00000571028 DNASE2BQ8WZ79 361 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 CENPIQ92674 756 aaPredicted RBP13.69□□□□□ -0.22
CCDC40-205ENST00000571028 NXPE2Q96DL1 559 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 P2RY11Q96G91 374 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 GABRG3Q99928 467 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 GPATCH2LQ9NWQ4 482 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 TOR4AQ9NXH8 423 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 UVRAGQ9P2Y5 699 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 IP6K2Q9UHH9 426 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 VANGL2Q9ULK5 521 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 PCDHGB2Q9Y5G2 931 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 RAI2Q9Y5P3 530 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 GON4LQ3T8J9 2241 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 TYW5A2RUC4 315 aaKnown RBP13.68□□□□□ -0.22
CCDC40-205ENST00000571028 I6L893 689 aaPredicted RBP13.68□□□□□ -0.22
CCDC40-205ENST00000571028 TNFSF14O43557 240 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 NRDCO43847 1150 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 LCA5LO95447 670 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 OXTRP30559 389 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 ADRA1BP35368 520 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 NUMBP49757 651 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 AUHQ13825 339 aaKnown RBP13.68□□□□□ -0.22
CCDC40-205ENST00000571028 INAVAQ3KP66 663 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 DCAF12L1Q5VU92 463 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 FBXL22Q6P050 247 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 LRRC31Q6UY01 552 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 BNIPLQ7Z465 357 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 SLFN11Q7Z7L1 901 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 RHOT2Q8IXI1 618 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 FAM217AQ8IXS0 508 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 PYROXD2Q8N2H3 581 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 CARNMT1Q8N4J0 409 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 ARFGAP1Q8N6T3 406 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 LSM14AQ8ND56 463 aaKnown RBP13.68□□□□□ -0.22
CCDC40-205ENST00000571028 RFFLQ8WZ73 363 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 SNX19Q92543 992 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 AZIN2Q96A70 460 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 PRICKLE1Q96MT3 831 aaPredicted RBP13.68□□□□□ -0.22
CCDC40-205ENST00000571028 ZNF830Q96NB3 372 aaPredicted RBP13.68□□□□□ -0.22
CCDC40-205ENST00000571028 RPRD1AQ96P16 312 aaPredicted RBP13.68□□□□□ -0.22
CCDC40-205ENST00000571028 FCRL3Q96P31 734 aaPredicted RBP13.68□□□□□ -0.22
CCDC40-205ENST00000571028 ZWILCHQ9H900 591 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 STOML2Q9UJZ1 356 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 INTUQ9ULD6 942 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 CLEC4EQ9ULY5 219 aa13.68□□□□□ -0.22
CCDC40-205ENST00000571028 REXO2Q9Y3B8 237 aaKnown RBP13.68□□□□□ -0.22
CCDC40-205ENST00000571028 RCCD1A6NED2 376 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 CAPN8A6NHC0 703 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 J3QKU1 62 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 GFRA2O00451 464 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 BUB1O43683 1085 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 PRPSAP2O60256 369 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 DKK1O94907 266 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 ACADMP11310 421 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 TNNT1P13805 278 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 MIPP30301 263 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 HNF1BP35680 557 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 GRK6P43250 576 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 KRT83P78385 493 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 CAMK2BQ13554 666 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 PIGHQ14442 188 aaPredicted RBP13.67□□□□□ -0.22
CCDC40-205ENST00000571028 TEAD4Q15561 434 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 SMAD1Q15797 465 aaKnown RBP13.67□□□□□ -0.22
CCDC40-205ENST00000571028 EFHC2Q5JST6 749 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 C6orf118Q5T5N4 469 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 FYB2Q5VWT5 728 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 RWDD4Q6NW29 188 aaKnown RBP13.67□□□□□ -0.22
CCDC40-205ENST00000571028 HJURPQ8NCD3 748 aaPredicted RBP13.67□□□□□ -0.22
CCDC40-205ENST00000571028 CCDC112Q8NEF3 446 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 FNIP1Q8TF40 1166 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 IGSF8Q969P0 613 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 PEBP4Q96S96 227 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 PRMT1Q99873 361 aaKnown RBP13.67□□□□□ -0.22
CCDC40-205ENST00000571028 DHX35Q9H5Z1 703 aaKnown RBP13.67□□□□□ -0.22
CCDC40-205ENST00000571028 WSB2Q9NYS7 404 aaPredicted RBP13.67□□□□□ -0.22
CCDC40-205ENST00000571028 EIF2B4Q9UI10 523 aaKnown RBP13.67□□□□□ -0.22
CCDC40-205ENST00000571028 HCN2Q9UL51 889 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 HYOU1Q9Y4L1 999 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 BPTFQ12830 3046 aa13.67□□□□□ -0.22
CCDC40-205ENST00000571028 MAST4O15021 2626 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 A0A0U1RQJ8 604 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 A0A1B0GVT2 93 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 PLK4O00444 970 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 CREB3O43889 395 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 CACNG3O60359 315 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 SYNCRIPO60506 623 aaKnown RBP13.66□□□□□ -0.22
CCDC40-205ENST00000571028 LRCH4O75427 683 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 PROSCO94903 275 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 PENKP01210 267 aaPredicted RBP13.66□□□□□ -0.22
CCDC40-205ENST00000571028 TCF4P15884 667 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 ITPKBP27987 946 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 HOXD9P28356 352 aaPredicted RBP13.66□□□□□ -0.22
CCDC40-205ENST00000571028 DGKGP49619 791 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 IRAK1P51617 712 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 AFF3P51826 1226 aaKnown RBP13.66□□□□□ -0.22
CCDC40-205ENST00000571028 VAV2P52735 878 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms