RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 AZI2Q9H6S1 392 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 MAGEF1Q9HAY2 307 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 WDR6Q9NNW5 1121 aaKnown RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 TUFT1Q9NNX1 390 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SAYSD1Q9NPB0 183 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SLC35C2Q9NQQ7 365 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 RMND1Q9NWS8 449 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 THG1LQ9NWX6 298 aaKnown RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 SLC39A1Q9NY26 324 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CYP39A1Q9NYL5 469 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 KLK14Q9P0G3 267 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SAMD15Q9P1V8 674 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 RBPJLQ9UBG7 517 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 DNAJB9Q9UBS3 223 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CD300AQ9UGN4 299 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 LIMA1Q9UHB6 759 aaKnown RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 MBD1Q9UIS9 605 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 ANGPTL2Q9UKU9 493 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SRPK3Q9UPE1 567 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SATB2Q9UPW6 733 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 NAALADL1Q9UQQ1 740 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 FNDC3AQ9Y2H6 1198 aaKnown RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 CLDN16Q9Y5I7 305 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 FAM169AQ9Y6X4 670 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SCN10AQ9Y5Y9 1956 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 PVALEFA0A1B0GWK0 134 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 FRMD3A2A2Y4 597 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CCDC78A2IDD5 438 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 TARSL2A2RTX5 802 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 LRRD1A4D1F6 860 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ENO4A6NNW6 628 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 LRRIQ3A6PVS8 624 aaPredicted RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 EIF3CLB5ME19 914 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 PTGES3LE9PB15 166 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 PDE2AO00408 941 aaPredicted RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 KRIT1O00522 736 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ZNF263O14978 683 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ATP2A1O14983 1001 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 N4BP3O15049 544 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 PER2O15055 1255 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ANGPT2O15123 496 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 VILLO15195 856 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 EPHB6O15197 1021 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CLIC2O15247 247 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 TEX28O15482 410 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CA12O43570 354 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 STRNO43815 780 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 TLL1O43897 1013 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 GMFGO60234 142 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ZNF862O60290 1169 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CYTIPO60759 359 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ZC3H11AO75152 810 aaKnown RBP eCLIP3.64□□□□□ -1.83
SMG6-208ENST00000570874 RECQL4O94761 1208 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 IPO13O94829 963 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 STBD1O95210 358 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 OR5F1O95221 314 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 IL18RAPO95256 599 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 METTL18O95568 372 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 S1PR4O95977 384 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 GYPCP04921 128 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CKMP06732 381 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 GALTP07902 379 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ANXA6P08133 673 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CSF1P09603 554 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 HNRNPA1P09651 372 aaKnown RBP eCLIP3.64□□□□□ -1.83
SMG6-208ENST00000570874 RALAP11233 206 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CCDC130P13994 396 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 JUNDP17535 347 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SP100P23497 879 aaPredicted RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 CCND2P30279 289 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 AXLP30530 894 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 HOXA7P31268 230 aaPredicted RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 CCR1P32246 355 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 PSMC2P35998 433 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 RABIFP47224 123 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 OR1G1P47890 313 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ARCN1P48444 511 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 CAMLGP49069 296 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 DNM2P50570 870 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 FXR1P51114 621 aaKnown RBP eCLIP3.64□□□□□ -1.83
SMG6-208ENST00000570874 AFF1P51825 1210 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 ATXN3P54252 364 aaPredicted RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 OAZ1P54368 228 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 NPEPPSP55786 919 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SCAND1P57086 179 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ABATP80404 500 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ARHGAP8P85298 464 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CDK17Q00537 523 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 PTSQ03393 145 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 TAP2Q03519 686 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 TBC1D8BQ0IIM8 1120 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 NNTQ13423 1086 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SLC12A1Q13621 1099 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 DAG1Q14118 895 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SPIDRQ14159 915 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 EPHA7Q15375 998 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 TARBP2Q15633 366 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 PGS1Q32NB8 556 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ZCWPW2Q504Y3 356 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 LRRC23Q53EV4 343 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms