RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CCDC137Q6PK04 289 aaKnown RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 ARHGEF18Q6ZSZ5 1173 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZNF572Q7Z3I7 529 aaPredicted RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 ADHFE1Q8IWW8 467 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 CCDC13Q8IYE1 715 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 NAT16Q8N8M0 369 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 C12orf50Q8NA57 414 aaPredicted RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 SPATA4Q8NEY3 305 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 FIBINQ8TAL6 211 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 TTC8Q8TAM2 541 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 CCHCR1Q8TD31 782 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 WFIKKN2Q8TEU8 576 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 NKD2Q969F2 451 aaPredicted RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 LRRC45Q96CN5 670 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 HDAC11Q96DB2 347 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 MYEOVQ96EZ4 313 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 MSANTD3Q96H12 275 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 OLFM3Q96PB7 478 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 KRT12Q99456 494 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 FAM83CQ9BQN1 747 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 HERPUD2Q9BSE4 406 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 CIPCQ9C0C6 399 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 DDX47Q9H0S4 455 aaKnown RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 LINC00597Q9H2U6 94 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 L2HGDHQ9H9P8 463 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 KCNK12Q9HB15 430 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 RBM12Q9NTZ6 932 aaKnown RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 GTSE1Q9NYZ3 720 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 KLHL8Q9P2G9 620 aaPredicted RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 DEC1Q9P2X7 70 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 SAE1Q9UBE0 346 aaPredicted RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 UBA2Q9UBT2 640 aaPredicted RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 ASIC3Q9UHC3 531 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 IPO11Q9UI26 975 aaKnown RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 SLC8A2Q9UPR5 921 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 TBC1D30Q9Y2I9 924 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 R3HDM2Q9Y2K5 976 aaKnown RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 DENND4AQ7Z401 1863 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 CDH23Q9H251 3354 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 GOLGA6CA6NDK9 693 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 GOLGA6BA6NDN3 693 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 RNF103O00237 685 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 PDE2AO00408 941 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 GFRA2O00451 464 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 NDC80O14777 642 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 TULP3O75386 442 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 ASLP04424 464 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 APODP05090 189 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 ITGAVP06756 1048 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 GOLGA6DP0CG33 693 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 SRFP11831 508 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 POLR2EP19388 210 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 COILP38432 576 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 NNMTP40261 264 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 EIF2DP41214 584 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 NUMBP49757 651 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 PAPOLAP51003 745 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 TUBB4BP68371 445 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZP2Q05996 745 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 SULT2A1Q06520 285 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZNF33AQ06730 810 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 PPIDQ08752 370 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 LMAN2Q12907 356 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 SERINC3Q13530 473 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 TDGQ13569 410 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 EIF4HQ15056 248 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 PRKD1Q15139 912 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 CYP1B1Q16678 543 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 P3H1Q32P28 736 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 PLEKHG6Q3KR16 790 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 ITPRIPL1Q6GPH6 555 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 DRICH1Q6PGQ1 229 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 RHBDF2Q6PJF5 856 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 SYDE1Q6ZW31 735 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 MAATS1Q7Z4T9 603 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 ARHGAP12Q8IWW6 846 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 SUGP1Q8IWZ8 645 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 ADGRG2Q8IZP9 1017 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 PAF1Q8N7H5 531 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 PRELID2Q8N945 189 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 FAM71DQ8N9W8 422 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 NETO2Q8NC67 525 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 OR7D4Q8NG98 312 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 SLC35B2Q8TB61 432 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 WFDC5Q8TCV5 224 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 UCMAQ8WVF2 138 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 ATXN2LQ8WWM7 1075 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 HTR3CQ8WXA8 447 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 ARHGEF2Q92974 986 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 ACDQ96AP0 544 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZNF599Q96NL3 588 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 LRRC3BQ96PB8 259 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 PNKPQ96T60 521 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 VAT1Q99536 393 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 LGMNQ99538 433 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 TMEM121Q9BTD3 319 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 CINPQ9BW66 212 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 PLA2G2FQ9BZM2 168 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 SLC39A8Q9C0K1 460 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 RAB17Q9H0T7 212 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms