RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 MTMR4Q9NYA4 1195 aa4.04□□□□□ -1.76
UBR1-211ENST00000569971 CPS1P31327 1500 aa4.04□□□□□ -1.76
UBR1-211ENST00000569971 CDK12Q9NYV4 1490 aaPredicted RBP4.04□□□□□ -1.76
UBR1-211ENST00000569971 ITSN1Q15811 1721 aa4.04□□□□□ -1.76
UBR1-211ENST00000569971 TECPR2O15040 1411 aa4.04□□□□□ -1.76
UBR1-211ENST00000569971 KIF13AQ9H1H9 1805 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 PI4KAP2A4QPH2 592 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 GUCY1B2O75343 617 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 TJP3O95049 919 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 MYCLP12524 364 aaPredicted RBP4.03□□□□□ -1.76
UBR1-211ENST00000569971 ARSAP15289 507 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 KRT4P19013 534 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 DUSP1P28562 367 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 COPB1P53618 953 aaKnown RBP4.03□□□□□ -1.76
UBR1-211ENST00000569971 CDH15P55291 814 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 HNRNPA0Q13151 305 aaKnown RBP4.03□□□□□ -1.76
UBR1-211ENST00000569971 BECN1Q14457 450 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 MVPQ14764 893 aaKnown RBP4.03□□□□□ -1.76
UBR1-211ENST00000569971 PRICKLE4Q2TBC4 344 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 ALDH1L2Q3SY69 923 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 RUNDC3AQ59EK9 446 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 PLAC9Q5JTB6 97 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 SH2D4BQ5SQS7 431 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 ABHD17BQ5VST6 288 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 NAA35Q5VZE5 725 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 KIAA0895LQ68EN5 471 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 KIRREL2Q6UWL6 708 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 ATF7IPQ6VMQ6 1270 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 KRBA2Q6ZNG9 492 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 TMTC3Q6ZXV5 915 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 B4GALNT4Q76KP1 1039 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 RHOUQ7L0Q8 258 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 CPLX4Q7Z7G2 160 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 MRGPREQ86SM8 312 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 SFTPA1Q8IWL2 248 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.03□□□□□ -1.76
UBR1-211ENST00000569971 DIS3L2Q8IYB7 885 aaKnown RBP4.03□□□□□ -1.76
UBR1-211ENST00000569971 RUFY2Q8WXA3 655 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 CAVIN3Q969G5 261 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 ELP4Q96EB1 424 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 COG3Q96JB2 828 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 MPHOSPH8Q99549 860 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 CENPOQ9BU64 300 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 MLST8Q9BVC4 326 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 INTS2Q9H0H0 1204 aaKnown RBP4.03□□□□□ -1.76
UBR1-211ENST00000569971 SLC25A18Q9H1K4 315 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 PDCL3Q9H2J4 239 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 KRT84Q9NSB2 600 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 SLC25A10Q9UBX3 287 aaPredicted RBP4.03□□□□□ -1.76
UBR1-211ENST00000569971 KLQ9UEF7 1012 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 POLG2Q9UHN1 485 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 CD207Q9UJ71 328 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 DDX19BQ9UMR2 479 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 ADAMTS5Q9UNA0 930 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 B3GNT3Q9Y2A9 372 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 LRRC7Q96NW7 1537 aa4.03□□□□□ -1.76
UBR1-211ENST00000569971 CPSF1Q10570 1443 aaKnown RBP4.03□□□□□ -1.76
UBR1-211ENST00000569971 NRXN3Q9Y4C0 1643 aa4.03□□□□□ -1.77
UBR1-211ENST00000569971 TMEM2Q9UHN6 1383 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 MON2Q7Z3U7 1717 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 UBR1Q8IWV7 1749 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 C3orf70A6NLC5 250 aaPredicted RBP4.02□□□□□ -1.77
UBR1-211ENST00000569971 QSOX1O00391 747 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 TSPAN4O14817 238 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 PTP4A3O75365 173 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 TIPRLO75663 272 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 IGHDP01880 384 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 GCP02774 474 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 ALDOAP04075 364 aaKnown RBP4.02□□□□□ -1.77
UBR1-211ENST00000569971 ELFN1P0C7U0 828 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 UBL4AP11441 157 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 NDUFB7P17568 137 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 IGFBP2P18065 325 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 MATN1P21941 496 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 PRPH2P23942 346 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 CHMP24386 653 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 MAPK4P31152 587 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 PRKAR2BP31323 418 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 HARS2P49590 506 aaKnown RBP4.02□□□□□ -1.77
UBR1-211ENST00000569971 CLNS1AP54105 237 aaKnown RBP4.02□□□□□ -1.77
UBR1-211ENST00000569971 DRG2P55039 364 aaKnown RBP4.02□□□□□ -1.77
UBR1-211ENST00000569971 SHC2P98077 582 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 SETQ01105 290 aaPredicted RBP4.02□□□□□ -1.77
UBR1-211ENST00000569971 ALKBH1Q13686 389 aaKnown RBP4.02□□□□□ -1.77
UBR1-211ENST00000569971 NAA25Q14CX7 972 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 RNASE12Q5GAN4 147 aaKnown RBP4.02□□□□□ -1.77
UBR1-211ENST00000569971 MTHFD1LQ6UB35 978 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 SLC39A5Q6ZMH5 540 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 Q6ZNX1 250 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 WDR53Q7Z5U6 358 aaPredicted RBP4.02□□□□□ -1.77
UBR1-211ENST00000569971 ADGRG6Q86SQ4 1221 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 PRIMA1Q86XR5 153 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 ITPRIPQ8IWB1 547 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 SRFBP1Q8NEF9 429 aaKnown RBP4.02□□□□□ -1.77
UBR1-211ENST00000569971 ZCCHC10Q8TBK6 192 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 ERP27Q96DN0 273 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 KAZALD1Q96I82 304 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 RSRC1Q96IZ7 334 aaKnown RBP4.02□□□□□ -1.77
UBR1-211ENST00000569971 CD180Q99467 661 aa4.02□□□□□ -1.77
UBR1-211ENST00000569971 TREX2Q9BQ50 279 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms