RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 LIPMQ5VYY2 423 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 PLA2G4FQ68DD2 849 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 FAM122CQ6P4D5 195 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 WDR59Q6PJI9 974 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 SATL1Q86VE3 508 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 SLC9A9Q8IVB4 645 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 OR6B3Q8NGW1 331 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 MRPL57Q9BQC6 102 aaKnown RBP7.21□□□□□ -1.26
CNOT1-216ENST00000569240 UGT1A7Q9HAW7 530 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 UGT1A10Q9HAW8 530 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 UGT1A8Q9HAW9 530 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 CATSPERZQ9NTU4 200 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 MAGED2Q9UNF1 606 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-216ENST00000569240 PCDHA10Q9Y5I2 948 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 FOXN3O00409 490 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-216ENST00000569240 HLA-DRAP01903 254 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 A1BGP04217 495 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 FYNP06241 537 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 HSMCR30P0CW71 290 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 CYP11B2P19099 503 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 NMT1P30419 496 aaKnown RBP7.21□□□□□ -1.26
CNOT1-216ENST00000569240 MERTKQ12866 999 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 SF3B3Q15393 1217 aaKnown RBP7.21□□□□□ -1.26
CNOT1-216ENST00000569240 SPDYE7PQ495Y7 208 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 PRR5LQ6MZQ0 368 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 POU5F2Q8N7G0 328 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 PCDH12Q9NPG4 1184 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 LIMD1Q9UGP4 676 aa7.21□□□□□ -1.26
CNOT1-216ENST00000569240 KIF1BO60333 1816 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 PTGES3LE9PB15 166 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 CCNT2O60583 730 aaKnown RBP7.2□□□□□ -1.26
CNOT1-216ENST00000569240 IL1BP01584 269 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 MYL9P24844 172 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 SCNN1DP51172 638 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 DDI2Q5TDH0 399 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 ZNF549Q6P9A3 640 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 BBS12Q6ZW61 710 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 TMEM17Q86X19 198 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 SPATA5L1Q9BVQ7 753 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 CMTM6Q9NX76 183 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 UBQLN1Q9UMX0 589 aaKnown RBP7.2□□□□□ -1.26
CNOT1-216ENST00000569240 PLLPQ9Y342 182 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 TADA2AO75478 443 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 PGK1P00558 417 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 IMPDH1P20839 514 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 EIF4BP23588 611 aaKnown RBP7.2□□□□□ -1.26
CNOT1-216ENST00000569240 GRIA3P42263 894 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 MAGEA2P43356 314 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 CA9Q16790 459 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 GALNT12Q8IXK2 581 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 ANKRA2Q9H9E1 313 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 ST3GAL5Q9UNP4 418 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 A0A0X1KG70 313 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 KBTBD13C9JR72 458 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 RGS14O43566 566 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 SLIT1O75093 1534 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 GSTT2BP0CG30 244 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 DBTP11182 482 aaKnown RBP7.2□□□□□ -1.26
CNOT1-216ENST00000569240 CD72P21854 359 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 POU1F1P28069 291 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 GRIA1P42261 906 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 GSTM5P46439 218 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 CRB1P82279 1406 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 KLRC3Q07444 240 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 SKIV2LQ15477 1246 aaKnown RBP7.2□□□□□ -1.26
CNOT1-216ENST00000569240 NRF1Q16656 503 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 CYP1B1Q16678 543 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 ALFQ53S48 1182 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 DGKKQ5KSL6 1271 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 IQSEC1Q6DN90 963 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 ZCCHC8Q6NZY4 707 aaKnown RBP7.2□□□□□ -1.26
CNOT1-216ENST00000569240 USP17L2Q6R6M4 530 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-216ENST00000569240 ELMOD2Q8IZ81 293 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 MEIOBQ8N635 442 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 SLC44A1Q8WWI5 657 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 PUS3Q9BZE2 481 aaKnown RBP7.2□□□□□ -1.26
CNOT1-216ENST00000569240 RIBC2Q9H4K1 309 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 ELOVL6Q9H5J4 265 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 RANBP3Q9H6Z4 567 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-216ENST00000569240 INTS10Q9NVR2 710 aaKnown RBP7.2□□□□□ -1.26
CNOT1-216ENST00000569240 TOR4AQ9NXH8 423 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 KIAA1210Q9ULL0 1709 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 CHKBQ9Y259 395 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 MAB21L2Q9Y586 359 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 FAM237BA0A1B0GVD1 139 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 H0YAE9 185 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 WNT7AO00755 349 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 TSPAN4O14817 238 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 SLC16A4O15374 487 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 CNPP09543 421 aaKnown RBP7.2□□□□□ -1.26
CNOT1-216ENST00000569240 CD40LGP29965 261 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 RBM34P42696 430 aaKnown RBP7.2□□□□□ -1.26
CNOT1-216ENST00000569240 CLCN5P51795 746 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 MTMR1Q13613 665 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 GNA13Q14344 377 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 TKFCQ3LXA3 575 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 ACSBG2Q5FVE4 666 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 USP49Q70CQ1 688 aa7.2□□□□□ -1.26
CNOT1-216ENST00000569240 SH3BP5LQ7L8J4 393 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms