RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 C11orf63Q6NUN7 778 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 LINGO4Q6UY18 593 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 VSIG1Q86XK7 387 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 LRRC8AQ8IWT6 810 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 TP53INP2Q8IXH6 220 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 FRMD1Q8N878 549 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 FAM131CQ96AQ9 280 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 ERLEC1Q96DZ1 483 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 PDLIM2Q96JY6 352 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 ZNF670Q9BS34 389 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 DESI2Q9BSY9 194 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 SPON2Q9BUD6 331 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 SLC39A8Q9C0K1 460 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 GOLPH3Q9H4A6 298 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 ITM2CQ9NQX7 267 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 DONSONQ9NYP3 566 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 SLC25A13Q9UJS0 675 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 HYOU1Q9Y4L1 999 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 ACTL7AQ9Y615 435 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 ADGRG1Q9Y653 693 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 ALG6Q9Y672 507 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 NUMA1Q14980 2115 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 DMXL1Q9Y485 3027 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 IGHV1OR15-9A0A0B4J2B8 117 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 TMEM110-MUSTN1A8MSY1 372 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 CBX4O00257 560 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 ARHGAP6O43182 974 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 COMTP21964 271 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 ARL4AP40617 200 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 CDH6P55285 790 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 ZBTB16Q05516 673 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 ELAVL3Q14576 367 aaKnown RBP12.67□□□□□ -0.38
RNF40-211ENST00000567365 PDK2Q15119 407 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 PLK5Q496M5 336 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 USP39Q53GS9 565 aaKnown RBP12.67□□□□□ -0.38
RNF40-211ENST00000567365 IL31Q6EBC2 164 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 Q6ZVU0 165 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 KBTBD6Q86V97 674 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 PLPP6Q8IY26 295 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 STK40Q8N2I9 435 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 FAM160A2Q8N612 972 aaPredicted RBP12.67□□□□□ -0.38
RNF40-211ENST00000567365 LZTR1Q8N653 840 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 PQLC3Q8N755 202 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 LRRC57Q8N9N7 239 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 CCDC112Q8NEF3 446 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 OR2A12Q8NGT7 310 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 PCDH19Q8TAB3 1148 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 RLN3Q8WXF3 142 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 RAPGEF5Q92565 580 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 ISG20Q96AZ6 181 aaKnown RBP12.67□□□□□ -0.38
RNF40-211ENST00000567365 SIPA1Q96FS4 1042 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 CALR3Q96L12 384 aaKnown RBP12.67□□□□□ -0.38
RNF40-211ENST00000567365 CEP44Q9C0F1 390 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 PRDM16Q9HAZ2 1276 aa12.67□□□□□ -0.38
RNF40-211ENST00000567365 SMG5Q9UPR3 1016 aaKnown RBP12.67□□□□□ -0.38
RNF40-211ENST00000567365 GON4LQ3T8J9 2241 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 ZSCAN5CA6NGD5 496 aaPredicted RBP12.66□□□□□ -0.38
RNF40-211ENST00000567365 GOLGA6L6A8MZA4 724 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 MCF2LO15068 1137 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 ALOX15BO15296 676 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 PRAMEF11O60813 436 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 ZNF217O75362 1048 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 IPO7O95373 1038 aaKnown RBP12.66□□□□□ -0.38
RNF40-211ENST00000567365 PEX11BO96011 259 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 KDELR1P24390 212 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 NNMTP40261 264 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 NOP2P46087 812 aaKnown RBP12.66□□□□□ -0.38
RNF40-211ENST00000567365 TPMTP51580 245 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 SIM2Q14190 667 aaPredicted RBP12.66□□□□□ -0.38
RNF40-211ENST00000567365 PAFAH1B3Q15102 231 aaKnown RBP12.66□□□□□ -0.38
RNF40-211ENST00000567365 INO80DQ53TQ3 878 aaPredicted RBP12.66□□□□□ -0.38
RNF40-211ENST00000567365 C22orf39Q6P5X5 142 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 PCDH20Q8N6Y1 951 aaKnown RBP12.66□□□□□ -0.38
RNF40-211ENST00000567365 ATP11CQ8NB49 1132 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 NETO2Q8NC67 525 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 CELF6Q96J87 481 aaKnown RBP12.66□□□□□ -0.38
RNF40-211ENST00000567365 DUSP15Q9H1R2 295 aaPredicted RBP12.66□□□□□ -0.38
RNF40-211ENST00000567365 KLHL11Q9NVR0 708 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 BCCIPQ9P287 314 aaKnown RBP eCLIP12.66□□□□□ -0.38
RNF40-211ENST00000567365 TRIM10Q9UDY6 481 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 SARDHQ9UL12 918 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 PPM1HQ9ULR3 514 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 INVSQ9Y283 1065 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 THADAQ6YHU6 1953 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 CEP192Q8TEP8 1941 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 DNAH14Q0VDD8 3507 aa12.66□□□□□ -0.38
RNF40-211ENST00000567365 PTPRZ1P23471 2315 aaPredicted RBP12.65□□□□□ -0.38
RNF40-211ENST00000567365 GRID2IPA4D2P6 1211 aa12.65□□□□□ -0.38
RNF40-211ENST00000567365 J3KR12 359 aa12.65□□□□□ -0.38
RNF40-211ENST00000567365 RNF103O00237 685 aa12.65□□□□□ -0.38
RNF40-211ENST00000567365 DAPK3O43293 454 aa12.65□□□□□ -0.38
RNF40-211ENST00000567365 PSTPIP1O43586 416 aa12.65□□□□□ -0.38
RNF40-211ENST00000567365 BUB1O43683 1085 aa12.65□□□□□ -0.38
RNF40-211ENST00000567365 LMNAP02545 664 aaKnown RBP12.65□□□□□ -0.38
RNF40-211ENST00000567365 CTSLP07711 333 aa12.65□□□□□ -0.38
RNF40-211ENST00000567365 MARCKSL1P49006 195 aa12.65□□□□□ -0.38
RNF40-211ENST00000567365 PAPOLAP51003 745 aaKnown RBP12.65□□□□□ -0.38
RNF40-211ENST00000567365 GEMIN4P57678 1058 aaKnown RBP12.65□□□□□ -0.38
RNF40-211ENST00000567365 FOXK2Q01167 660 aa12.65□□□□□ -0.38
RNF40-211ENST00000567365 CST6Q15828 149 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms