RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 DGKHQ86XP1 1220 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 ENDOVQ8N8Q3 282 aaKnown RBP2.48□□□□□ -2.01
SMG1-212ENST00000566328 MAB21L3Q8N8X9 362 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 ZNF485Q8NCK3 441 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 SPATA20Q8TB22 786 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 APOL5Q9BWW9 433 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 MMP28Q9H239 520 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 EVA1AQ9H8M9 152 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 ARL15Q9NXU5 204 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 RAB21Q9UL25 225 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 TCF19Q9Y242 345 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 MAN2B2Q9Y2E5 1009 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 DTNAQ9Y4J8 743 aa2.48□□□□□ -2.01
SMG1-212ENST00000566328 COPG1Q9Y678 874 aaKnown RBP2.48□□□□□ -2.01
SMG1-212ENST00000566328 IGKV3D-20A0A0C4DH25 116 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 TCRBV7S3A2A0A539 114 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 VSTM5A8MXK1 200 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 PRAC2D3DTV9 90 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 FAM72CH0Y354 149 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 M0QYT0 321 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 TULP2O00295 520 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 HSPB6O14558 160 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 APOL1O14791 398 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 RNMTO43148 476 aaKnown RBP2.47□□□□□ -2.01
SMG1-212ENST00000566328 IGSF3O75054 1194 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 NDST3O95803 873 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 TBX6O95947 436 aaPredicted RBP2.47□□□□□ -2.01
SMG1-212ENST00000566328 SCGB1D2O95969 90 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 IGBP1P78318 339 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 ST3GAL1Q11201 340 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 DLG1Q12959 904 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 RBBP5Q15291 538 aaKnown RBP2.47□□□□□ -2.01
SMG1-212ENST00000566328 FCN2Q15485 313 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 GFOD2Q3B7J2 385 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 ARL13BQ3SXY8 428 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 ODR4Q5SWX8 454 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 FAM72AQ5TYM5 149 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 ARL6IP4Q66PJ3 421 aaKnown RBP2.47□□□□□ -2.01
SMG1-212ENST00000566328 ZNF772Q68DY9 489 aaPredicted RBP2.47□□□□□ -2.01
SMG1-212ENST00000566328 NCAPH2Q6IBW4 605 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 FAM72DQ6L9T8 149 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 SLC30A9Q6PML9 568 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 PATL1Q86TB9 770 aaKnown RBP2.47□□□□□ -2.01
SMG1-212ENST00000566328 MYPOPQ86VE0 399 aaPredicted RBP2.47□□□□□ -2.01
SMG1-212ENST00000566328 FAM72BQ86X60 149 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 TMEM217Q8N7C4 229 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 TEX45Q8NA69 505 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 GLIS1Q8NBF1 620 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 FAM110DQ8TAY7 271 aaPredicted RBP2.47□□□□□ -2.01
SMG1-212ENST00000566328 NEK9Q8TD19 979 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 SECTM1Q8WVN6 248 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 SCMH1Q96GD3 660 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 ZNF385AQ96PM9 386 aaKnown RBP2.47□□□□□ -2.01
SMG1-212ENST00000566328 CCDC134Q9H6E4 229 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 UBTD1Q9HAC8 227 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 TMEM248Q9NWD8 314 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 SEL1LQ9UBV2 794 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 TRPC5Q9UL62 973 aaPredicted RBP2.47□□□□□ -2.01
SMG1-212ENST00000566328 SLC45A1Q9Y2W3 748 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 PKP3Q9Y446 797 aa2.47□□□□□ -2.01
SMG1-212ENST00000566328 A0A1B0GVM2 712 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 EDIL3O43854 480 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 XPNPEP2O43895 674 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 ZG16O60844 167 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 CRYAAP02489 173 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 APOHP02749 345 aaPredicted RBP2.46□□□□□ -2.02
SMG1-212ENST00000566328 TSHRP16473 764 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 PRKCHP24723 683 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 RFC1P35251 1148 aaPredicted RBP2.46□□□□□ -2.02
SMG1-212ENST00000566328 STT3AP46977 705 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 MXI1P50539 228 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 ATP12AP54707 1039 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 ZBTB16Q05516 673 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 NFE2Q16621 373 aaPredicted RBP2.46□□□□□ -2.02
SMG1-212ENST00000566328 ZACNQ401N2 412 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 TYW3Q6IPR3 259 aaKnown RBP2.46□□□□□ -2.02
SMG1-212ENST00000566328 FBXO38Q6PIJ6 1188 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 TUBA1AQ71U36 451 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 DGLUCYQ7Z3D6 616 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 TXLNBQ8N3L3 684 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 RNF152Q8N8N0 203 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 ZNF114Q8NC26 417 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 SORCS1Q8WY21 1168 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 TTC17Q96AE7 1141 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 TUBA1CQ9BQE3 449 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 TRMT61BQ9BVS5 477 aaKnown RBP2.46□□□□□ -2.02
SMG1-212ENST00000566328 FRMD8Q9BZ67 464 aaPredicted RBP2.46□□□□□ -2.02
SMG1-212ENST00000566328 EPS8L2Q9H6S3 715 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 NECTIN3Q9NQS3 549 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 SLC52A1Q9NWF4 448 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 CDH22Q9UJ99 828 aa2.46□□□□□ -2.02
SMG1-212ENST00000566328 WDR81Q562E7 1941 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 FAM234BA2RU67 622 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 MBD3L5A6NJ08 208 aaPredicted RBP2.45□□□□□ -2.02
SMG1-212ENST00000566328 KDM4EB2RXH2 506 aaPredicted RBP2.45□□□□□ -2.02
SMG1-212ENST00000566328 KPNA5O15131 536 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 PQBP1O60828 265 aaKnown RBP2.45□□□□□ -2.02
SMG1-212ENST00000566328 LARGE1O95461 756 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 ANXA6P08133 673 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 CFC1BP0CG36 223 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms