RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 MMEP08473 750 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 TBC1D3HP0C7X1 549 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 CHRNB2P17787 502 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 TFE3P19532 575 aaPredicted RBP15.54■□□□□ 0.08
CMTM3-212ENST00000566121 ADRA1BP35368 520 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 STAT1P42224 750 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 NXPH1P58417 271 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 RNASE9P60153 205 aaKnown RBP15.54■□□□□ 0.08
CMTM3-212ENST00000566121 FMO1Q01740 532 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 SMAD1Q15797 465 aaKnown RBP15.54■□□□□ 0.08
CMTM3-212ENST00000566121 MANEALQ5VSG8 457 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 TBC1D3GQ6DHY5 549 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 TBC1D3CQ6IPX1 549 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 TRNP1Q6NT89 227 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 RETSATQ6NUM9 610 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.54■□□□□ 0.08
CMTM3-212ENST00000566121 TBC1D3Q8IZP1 549 aaPredicted RBP15.54■□□□□ 0.08
CMTM3-212ENST00000566121 GALNT15Q8N3T1 639 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 PIP4K2CQ8TBX8 421 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 SLC6A18Q96N87 628 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 GBP4Q96PP9 640 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 ZYG11BQ9C0D3 744 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 MUC3BQ9H195 1237 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 ANO10Q9NW15 660 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 VPS51Q9UID3 782 aa15.54■□□□□ 0.08
CMTM3-212ENST00000566121 C2CD4BA6NLJ0 364 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 PRAMEF26H0Y7S4 382 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 PES1O00541 588 aaKnown RBP15.53■□□□□ 0.08
CMTM3-212ENST00000566121 ZNF821O75541 412 aaPredicted RBP15.53■□□□□ 0.08
CMTM3-212ENST00000566121 MT-CO1P00395 513 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 VAV1P15498 845 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 ZNF18P17022 549 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 OR1E1P30953 314 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 CHRNA3P32297 505 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 ANP32AP39687 249 aaKnown RBP15.53■□□□□ 0.08
CMTM3-212ENST00000566121 ARRB1P49407 418 aaPredicted RBP15.53■□□□□ 0.08
CMTM3-212ENST00000566121 CNTN1Q12860 1018 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 PTP4A2Q12974 167 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 ARL13BQ3SXY8 428 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 ACCSLQ4AC99 568 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 NAA35Q5VZE5 725 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 PHF13Q86YI8 300 aaPredicted RBP15.53■□□□□ 0.08
CMTM3-212ENST00000566121 PCDH20Q8N6Y1 951 aaKnown RBP15.53■□□□□ 0.08
CMTM3-212ENST00000566121 ANKRD20A12PQ8NF67 263 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 GPT2Q8TD30 523 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 CPA5Q8WXQ8 436 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 NTAN1Q96AB6 310 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 IFT43Q96FT9 208 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 LRIG1Q96JA1 1093 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 SERAC1Q96JX3 654 aa15.53■□□□□ 0.08
CMTM3-212ENST00000566121 A0A0D9SEW6 157 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 FAM47DPA6NHR8 397 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 LGALS16A8MUM7 142 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 RHOQP17081 205 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 MAPKAPK2P49137 400 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 GEMIN4P57678 1058 aaKnown RBP15.52■□□□□ 0.08
CMTM3-212ENST00000566121 TAS2R38P59533 333 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 POLR2FP61218 127 aaKnown RBP15.52■□□□□ 0.08
CMTM3-212ENST00000566121 MYL5Q02045 173 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 SCAPQ12770 1279 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 ILKQ13418 452 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 SHBQ15464 509 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 CCDC14Q49A88 953 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 SETMARQ53H47 684 aaPredicted RBP15.52■□□□□ 0.08
CMTM3-212ENST00000566121 HSP90AA4PQ58FG1 418 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 PIP5KL1Q5T9C9 394 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 SFMBT2Q5VUG0 894 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 TAF3Q5VWG9 929 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 PPP1R2P3Q6NXS1 205 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 Q6ZVU0 165 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 ATP11CQ8NB49 1132 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 TMEM145Q8NBT3 493 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 VPS16Q9H269 839 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 FANCLQ9NW38 375 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 TAB2Q9NYJ8 693 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 OR12D3Q9UGF7 316 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 MYO6Q9UM54 1294 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 BTBD3Q9Y2F9 522 aa15.52■□□□□ 0.08
CMTM3-212ENST00000566121 CHD5Q8TDI0 1954 aa15.52■□□□□ 0.07
CMTM3-212ENST00000566121 SIGLEC16A6NMB1 481 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 SRRM3A6NNA2 597 aaPredicted RBP15.51■□□□□ 0.07
CMTM3-212ENST00000566121 AP1G1O43747 822 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 CALB1P05937 261 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 CTSLP07711 333 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 ATXN1LP0C7T5 689 aaKnown RBP15.51■□□□□ 0.07
CMTM3-212ENST00000566121 EPHA8P29322 1005 aaPredicted RBP15.51■□□□□ 0.07
CMTM3-212ENST00000566121 SDC4P31431 198 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 SERPINH1P50454 418 aaKnown RBP15.51■□□□□ 0.07
CMTM3-212ENST00000566121 COPB1P53618 953 aaKnown RBP15.51■□□□□ 0.07
CMTM3-212ENST00000566121 AIF1P55008 147 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 GNA12Q03113 381 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 C1QBPQ07021 282 aaKnown RBP15.51■□□□□ 0.07
CMTM3-212ENST00000566121 APTXQ7Z2E3 356 aaKnown RBP15.51■□□□□ 0.07
CMTM3-212ENST00000566121 KANSL1Q7Z3B3 1105 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 NLRP14Q86W24 1093 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 TMPRSS12Q86WS5 348 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 PROSER1Q86XN7 944 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 DCP2Q8IU60 420 aaKnown RBP15.51■□□□□ 0.07
CMTM3-212ENST00000566121 C3orf20Q8ND61 904 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 RXFP2Q8WXD0 754 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms