RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ARMCX3Q9UH62 379 aaPredicted RBP13.1□□□□□ -0.31
RNF40-208ENST00000565995 SLC12A6Q9UHW9 1150 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 SLC25A13Q9UJS0 675 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 HS3ST2Q9Y278 367 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 TBC1D30Q9Y2I9 924 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 PCDHGA8Q9Y5G5 932 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 CSNK1G3Q9Y6M4 447 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 AHCTF1Q8WYP5 2266 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 A0A1W2PNU3 283 aaPredicted RBP13.09□□□□□ -0.31
RNF40-208ENST00000565995 A0A1W2PQ27 194 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 A0A1W2PQ64 194 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 A0A1W2PQU0 124 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 GOLGA6L4A6NEF3 574 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 K7ESM1 405 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 SLC31A1O15431 190 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 ZNF202O95125 648 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 CTSLP07711 333 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 AKT2P31751 481 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 MLLT3P42568 568 aaPredicted RBP13.09□□□□□ -0.31
RNF40-208ENST00000565995 HNRNPKP61978 463 aaKnown RBP eCLIP13.09□□□□□ -0.31
RNF40-208ENST00000565995 GCNT1Q02742 428 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 ACCSLQ4AC99 568 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 TMEM259Q4ZIN3 620 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 RABGAP1LQ5R372 815 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 GCNT7Q6ZNI0 430 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 SMYD4Q8IYR2 804 aaPredicted RBP13.09□□□□□ -0.31
RNF40-208ENST00000565995 OR52K2Q8NGK3 314 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 FAM149B1Q96BN6 582 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 BMFQ96LC9 184 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 THAP9Q9H5L6 903 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 NCKIPSDQ9NZQ3 722 aa13.09□□□□□ -0.31
RNF40-208ENST00000565995 ZFR2Q9UPR6 939 aaKnown RBP13.09□□□□□ -0.31
RNF40-208ENST00000565995 ARHGEF17Q96PE2 2063 aaPredicted RBP13.09□□□□□ -0.31
RNF40-208ENST00000565995 P4HA2O15460 535 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 FFAR2O15552 330 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 WISP1O95388 367 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 CALCAP01258 141 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 SRCP12931 536 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 ZNF18P17022 549 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 TGM2P21980 687 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 PITX1P78337 314 aaPredicted RBP13.08□□□□□ -0.32
RNF40-208ENST00000565995 LRRC63Q05C16 580 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 POM121L1PQ3SYA9 428 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 ZNF658Q5TYW1 1059 aaPredicted RBP13.08□□□□□ -0.32
RNF40-208ENST00000565995 ZCCHC8Q6NZY4 707 aaKnown RBP13.08□□□□□ -0.32
RNF40-208ENST00000565995 FBXL22Q6P050 247 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 CLEC17AQ6ZS10 378 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 Q6ZVU0 165 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 CLEC14AQ86T13 490 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 OR2A12Q8NGT7 310 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 TPCN2Q8NHX9 752 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 IFI44Q8TCB0 444 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 KAT5Q92993 513 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 NOX5Q96PH1 765 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 MED15Q96RN5 788 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 TSG101Q99816 390 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 SRRTQ9BXP5 876 aaKnown RBP13.08□□□□□ -0.32
RNF40-208ENST00000565995 HDAC8Q9BY41 377 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 ABCG4Q9H172 646 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 SALL4Q9UJQ4 1053 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 SATB2Q9UPW6 733 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 ENTPD2Q9Y5L3 495 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 DOPEY2Q9Y3R5 2298 aa13.08□□□□□ -0.32
RNF40-208ENST00000565995 ANKRD36A6QL64 1941 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 SPTY2D1-AS1A0A0U1RR47 76 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 EME2A4GXA9 379 aaPredicted RBP13.07□□□□□ -0.32
RNF40-208ENST00000565995 A6NNZ2 444 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 TPP1O14773 563 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 ARHGAP6O43182 974 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 CLDN11O75508 207 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 TCEA3O75764 348 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 CSF2P04141 144 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 GLI1P08151 1106 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 NME1P15531 152 aaKnown RBP13.07□□□□□ -0.32
RNF40-208ENST00000565995 PRLRP16471 622 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 CCR1P32246 355 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 CHRNA3P32297 505 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 PMS1P54277 932 aaKnown RBP13.07□□□□□ -0.32
RNF40-208ENST00000565995 AUHQ13825 339 aaKnown RBP13.07□□□□□ -0.32
RNF40-208ENST00000565995 FZD2Q14332 565 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 ARL13BQ3SXY8 428 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 XKR5Q6UX68 686 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 Q6ZSR6 202 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 CIR1Q86X95 450 aaPredicted RBP13.07□□□□□ -0.32
RNF40-208ENST00000565995 PPM1KQ8N3J5 372 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 SPATA20Q8TB22 786 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 MAPK15Q8TD08 544 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 ARRDC3Q96B67 414 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 LENG8Q96PV6 779 aaPredicted RBP13.07□□□□□ -0.32
RNF40-208ENST00000565995 GSDMAQ96QA5 445 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 SLC2A13Q96QE2 648 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 CALN1Q9BXU9 219 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 ST7Q9NRC1 585 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 ASNSD1Q9NWL6 643 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 RMND1Q9NWS8 449 aa13.07□□□□□ -0.32
RNF40-208ENST00000565995 FARP1Q9Y4F1 1045 aaPredicted RBP13.07□□□□□ -0.32
RNF40-208ENST00000565995 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.06□□□□□ -0.32
RNF40-208ENST00000565995 E5RJQ4 531 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 RNF103O00237 685 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 MT-CO1P00395 513 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms